Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM13Q9H4Q3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM13Q9H4Q3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM13Q9H4Q3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRDM13Q9H4Q3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM13Q9H4Q3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.83■□□□□ 0.93
PRDM13Q9H4Q3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.83■□□□□ 0.93
PRDM13Q9H4Q3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.83■□□□□ 0.93
PRDM13Q9H4Q3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.83■□□□□ 0.92
PRDM13Q9H4Q3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRDM13Q9H4Q3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM13Q9H4Q3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PRDM13Q9H4Q3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PRDM13Q9H4Q3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.82■□□□□ 0.92
PRDM13Q9H4Q3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.82■□□□□ 0.92
PRDM13Q9H4Q3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM13Q9H4Q3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM13Q9H4Q3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
PRDM13Q9H4Q3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM13Q9H4Q3 AL135925.1-201ENST00000605920 1701 ntBASIC20.81■□□□□ 0.92
PRDM13Q9H4Q3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.81■□□□□ 0.92
PRDM13Q9H4Q3 AC127502.1-201ENST00000399971 1502 ntBASIC20.8■□□□□ 0.92
PRDM13Q9H4Q3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM13Q9H4Q3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM13Q9H4Q3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM13Q9H4Q3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM13Q9H4Q3 AC135983.2-203ENST00000454486 1613 ntBASIC20.79■□□□□ 0.92
PRDM13Q9H4Q3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.79■□□□□ 0.92
PRDM13Q9H4Q3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.79■□□□□ 0.92
PRDM13Q9H4Q3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM13Q9H4Q3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.78■□□□□ 0.92
PRDM13Q9H4Q3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM13Q9H4Q3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM13Q9H4Q3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM13Q9H4Q3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM13Q9H4Q3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM13Q9H4Q3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.77■□□□□ 0.92
PRDM13Q9H4Q3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM13Q9H4Q3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.76■□□□□ 0.91
PRDM13Q9H4Q3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.76■□□□□ 0.91
PRDM13Q9H4Q3 AC008813.1-201ENST00000536597 885 ntBASIC20.76■□□□□ 0.91
PRDM13Q9H4Q3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM13Q9H4Q3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM13Q9H4Q3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRDM13Q9H4Q3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM13Q9H4Q3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM13Q9H4Q3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PRDM13Q9H4Q3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRDM13Q9H4Q3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.74■□□□□ 0.91
PRDM13Q9H4Q3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.74■□□□□ 0.91
PRDM13Q9H4Q3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM13Q9H4Q3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM13Q9H4Q3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM13Q9H4Q3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.73■□□□□ 0.91
PRDM13Q9H4Q3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM13Q9H4Q3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM13Q9H4Q3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM13Q9H4Q3 WHAMMP2-203ENST00000563942 1603 ntBASIC20.72■□□□□ 0.91
PRDM13Q9H4Q3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM13Q9H4Q3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.72■□□□□ 0.91
PRDM13Q9H4Q3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PRDM13Q9H4Q3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM13Q9H4Q3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM13Q9H4Q3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM13Q9H4Q3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PRDM13Q9H4Q3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRDM13Q9H4Q3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM13Q9H4Q3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PRDM13Q9H4Q3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.7■□□□□ 0.9
PRDM13Q9H4Q3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.7■□□□□ 0.9
PRDM13Q9H4Q3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM13Q9H4Q3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM13Q9H4Q3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.68■□□□□ 0.9
PRDM13Q9H4Q3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.68■□□□□ 0.9
PRDM13Q9H4Q3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PRDM13Q9H4Q3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
PRDM13Q9H4Q3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
PRDM13Q9H4Q3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM13Q9H4Q3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM13Q9H4Q3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM13Q9H4Q3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM13Q9H4Q3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.67■□□□□ 0.9
PRDM13Q9H4Q3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.67■□□□□ 0.9
PRDM13Q9H4Q3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM13Q9H4Q3 GPX1-201ENST00000419349 1106 ntBASIC20.66■□□□□ 0.9
PRDM13Q9H4Q3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM13Q9H4Q3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM13Q9H4Q3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
PRDM13Q9H4Q3 RARRES2P2-201ENST00000394842 485 ntBASIC20.65■□□□□ 0.9
PRDM13Q9H4Q3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PRDM13Q9H4Q3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms