Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHB18PQ96TA0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHB18PQ96TA0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHB18PQ96TA0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHB18PQ96TA0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHB18PQ96TA0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.05■■□□□ 1.92
PCDHB18PQ96TA0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.05■■□□□ 1.92
PCDHB18PQ96TA0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHB18PQ96TA0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHB18PQ96TA0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHB18PQ96TA0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHB18PQ96TA0 RPS2P35-201ENST00000443417 897 ntBASIC27.04■■□□□ 1.92
PCDHB18PQ96TA0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.04■■□□□ 1.92
PCDHB18PQ96TA0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHB18PQ96TA0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHB18PQ96TA0 AL121749.1-202ENST00000609313 2153 ntBASIC27.02■■□□□ 1.92
PCDHB18PQ96TA0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHB18PQ96TA0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDHB18PQ96TA0 AC021231.2-201ENST00000594613 730 ntBASIC27.02■■□□□ 1.92
PCDHB18PQ96TA0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHB18PQ96TA0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PCDHB18PQ96TA0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHB18PQ96TA0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.01■■□□□ 1.91
PCDHB18PQ96TA0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHB18PQ96TA0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
PCDHB18PQ96TA0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.99■■□□□ 1.91
PCDHB18PQ96TA0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDHB18PQ96TA0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHB18PQ96TA0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
PCDHB18PQ96TA0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHB18PQ96TA0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
PCDHB18PQ96TA0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHB18PQ96TA0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHB18PQ96TA0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHB18PQ96TA0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHB18PQ96TA0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHB18PQ96TA0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHB18PQ96TA0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHB18PQ96TA0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHB18PQ96TA0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.96■■□□□ 1.91
PCDHB18PQ96TA0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
PCDHB18PQ96TA0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHB18PQ96TA0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.94■■□□□ 1.9
PCDHB18PQ96TA0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.94■■□□□ 1.9
PCDHB18PQ96TA0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHB18PQ96TA0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.94■■□□□ 1.9
PCDHB18PQ96TA0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
PCDHB18PQ96TA0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHB18PQ96TA0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
PCDHB18PQ96TA0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
PCDHB18PQ96TA0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.93■■□□□ 1.9
PCDHB18PQ96TA0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHB18PQ96TA0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHB18PQ96TA0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHB18PQ96TA0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHB18PQ96TA0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.92■■□□□ 1.9
PCDHB18PQ96TA0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHB18PQ96TA0 DUX4L29-201ENST00000425409 679 ntBASIC26.91■■□□□ 1.9
PCDHB18PQ96TA0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
PCDHB18PQ96TA0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.91■■□□□ 1.9
PCDHB18PQ96TA0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PCDHB18PQ96TA0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB18PQ96TA0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB18PQ96TA0 AC018358.1-201ENST00000631079 1402 ntBASIC26.9■■□□□ 1.9
PCDHB18PQ96TA0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PCDHB18PQ96TA0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB18PQ96TA0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHB18PQ96TA0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDHB18PQ96TA0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDHB18PQ96TA0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHB18PQ96TA0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.89■■□□□ 1.89
PCDHB18PQ96TA0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
PCDHB18PQ96TA0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
PCDHB18PQ96TA0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHB18PQ96TA0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB18PQ96TA0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB18PQ96TA0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB18PQ96TA0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHB18PQ96TA0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB18PQ96TA0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB18PQ96TA0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
PCDHB18PQ96TA0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
PCDHB18PQ96TA0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB18PQ96TA0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB18PQ96TA0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB18PQ96TA0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHB18PQ96TA0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHB18PQ96TA0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHB18PQ96TA0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
PCDHB18PQ96TA0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB18PQ96TA0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDHB18PQ96TA0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB18PQ96TA0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB18PQ96TA0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB18PQ96TA0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHB18PQ96TA0 AC110285.7-201ENST00000624417 1536 ntBASIC26.82■■□□□ 1.88
PCDHB18PQ96TA0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHB18PQ96TA0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHB18PQ96TA0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHB18PQ96TA0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms