Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE2Q96FN4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE2Q96FN4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE2Q96FN4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.82■■□□□ 1.08
CPNE2Q96FN4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE2Q96FN4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.81■■□□□ 1.08
CPNE2Q96FN4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE2Q96FN4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.81■■□□□ 1.08
CPNE2Q96FN4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE2Q96FN4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE2Q96FN4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE2Q96FN4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE2Q96FN4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE2Q96FN4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE2Q96FN4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE2Q96FN4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CPNE2Q96FN4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE2Q96FN4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE2Q96FN4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CPNE2Q96FN4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 SUZ12P1-203ENST00000578195 985 ntBASIC21.76■■□□□ 1.07
CPNE2Q96FN4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE2Q96FN4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE2Q96FN4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE2Q96FN4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CPNE2Q96FN4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE2Q96FN4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE2Q96FN4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE2Q96FN4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE2Q96FN4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE2Q96FN4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE2Q96FN4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE2Q96FN4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 AC135983.2-203ENST00000454486 1613 ntBASIC21.72■■□□□ 1.07
CPNE2Q96FN4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE2Q96FN4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE2Q96FN4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CPNE2Q96FN4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE2Q96FN4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
CPNE2Q96FN4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CPNE2Q96FN4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE2Q96FN4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.7■■□□□ 1.06
CPNE2Q96FN4 MIR3665-201ENST00000578708 105 ntBASIC21.7■■□□□ 1.06
CPNE2Q96FN4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE2Q96FN4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CPNE2Q96FN4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.69■■□□□ 1.06
CPNE2Q96FN4 AC018358.1-201ENST00000631079 1402 ntBASIC21.69■■□□□ 1.06
CPNE2Q96FN4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE2Q96FN4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE2Q96FN4 LINC00273-201ENST00000539813 1452 ntBASIC21.68■■□□□ 1.06
CPNE2Q96FN4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE2Q96FN4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE2Q96FN4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE2Q96FN4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE2Q96FN4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE2Q96FN4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.66■■□□□ 1.06
CPNE2Q96FN4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE2Q96FN4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE2Q96FN4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE2Q96FN4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPNE2Q96FN4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CPNE2Q96FN4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE2Q96FN4 AP006261.1-201ENST00000584783 668 ntBASIC21.65■■□□□ 1.06
CPNE2Q96FN4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.65■■□□□ 1.06
CPNE2Q96FN4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPNE2Q96FN4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CPNE2Q96FN4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CPNE2Q96FN4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CPNE2Q96FN4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CPNE2Q96FN4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CPNE2Q96FN4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms