Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 LINC01003-201ENST00000564834 1764 ntBASIC27.66■■■□□ 2.02
NEK11Q8NG66 AC108673.1-201ENST00000510422 1159 ntBASIC27.66■■■□□ 2.02
NEK11Q8NG66 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.66■■■□□ 2.02
NEK11Q8NG66 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
NEK11Q8NG66 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NEK11Q8NG66 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
NEK11Q8NG66 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
NEK11Q8NG66 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
NEK11Q8NG66 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.64■■■□□ 2.02
NEK11Q8NG66 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
NEK11Q8NG66 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
NEK11Q8NG66 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
NEK11Q8NG66 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
NEK11Q8NG66 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.63■■■□□ 2.01
NEK11Q8NG66 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
NEK11Q8NG66 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.63■■■□□ 2.01
NEK11Q8NG66 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.62■■■□□ 2.01
NEK11Q8NG66 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NEK11Q8NG66 DUX4L28-201ENST00000623687 678 ntBASIC27.62■■■□□ 2.01
NEK11Q8NG66 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
NEK11Q8NG66 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.61■■■□□ 2.01
NEK11Q8NG66 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NEK11Q8NG66 AP002414.2-202ENST00000590929 1450 ntBASIC27.61■■■□□ 2.01
NEK11Q8NG66 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.61■■■□□ 2.01
NEK11Q8NG66 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.6■■■□□ 2.01
NEK11Q8NG66 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
NEK11Q8NG66 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
NEK11Q8NG66 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.6■■■□□ 2.01
NEK11Q8NG66 MIR6090-201ENST00000622481 60 ntBASIC27.6■■■□□ 2.01
NEK11Q8NG66 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
NEK11Q8NG66 AC135983.2-203ENST00000454486 1613 ntBASIC27.59■■■□□ 2.01
NEK11Q8NG66 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.59■■■□□ 2.01
NEK11Q8NG66 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
NEK11Q8NG66 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
NEK11Q8NG66 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
NEK11Q8NG66 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
NEK11Q8NG66 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
NEK11Q8NG66 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
NEK11Q8NG66 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.58■■■□□ 2
NEK11Q8NG66 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.57■■■□□ 2
NEK11Q8NG66 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.57■■■□□ 2
NEK11Q8NG66 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.57■■■□□ 2
NEK11Q8NG66 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.57■■■□□ 2
NEK11Q8NG66 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
NEK11Q8NG66 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.57■■■□□ 2
NEK11Q8NG66 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
NEK11Q8NG66 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
NEK11Q8NG66 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.56■■■□□ 2
NEK11Q8NG66 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.55■■■□□ 2
NEK11Q8NG66 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.55■■■□□ 2
NEK11Q8NG66 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
NEK11Q8NG66 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NEK11Q8NG66 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NEK11Q8NG66 MIR3665-201ENST00000578708 105 ntBASIC27.54■■■□□ 2
NEK11Q8NG66 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.54■■■□□ 2
NEK11Q8NG66 WHAMMP2-203ENST00000563942 1603 ntBASIC27.53■■■□□ 2
NEK11Q8NG66 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
NEK11Q8NG66 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NEK11Q8NG66 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
NEK11Q8NG66 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NEK11Q8NG66 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.52■■■□□ 2
NEK11Q8NG66 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
NEK11Q8NG66 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.52■■■□□ 2
NEK11Q8NG66 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
NEK11Q8NG66 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.51■■■□□ 2
NEK11Q8NG66 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
NEK11Q8NG66 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
NEK11Q8NG66 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.5■■□□□ 1.99
NEK11Q8NG66 LINC00273-201ENST00000539813 1452 ntBASIC27.5■■□□□ 1.99
NEK11Q8NG66 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK11Q8NG66 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK11Q8NG66 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK11Q8NG66 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
NEK11Q8NG66 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK11Q8NG66 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK11Q8NG66 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
NEK11Q8NG66 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.48■■□□□ 1.99
NEK11Q8NG66 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
NEK11Q8NG66 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.48■■□□□ 1.99
NEK11Q8NG66 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
NEK11Q8NG66 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
NEK11Q8NG66 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
NEK11Q8NG66 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.47■■□□□ 1.99
NEK11Q8NG66 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NEK11Q8NG66 AP006261.1-201ENST00000584783 668 ntBASIC27.46■■□□□ 1.99
NEK11Q8NG66 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
NEK11Q8NG66 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
NEK11Q8NG66 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
NEK11Q8NG66 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
NEK11Q8NG66 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.44■■□□□ 1.98
NEK11Q8NG66 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK11Q8NG66 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK11Q8NG66 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK11Q8NG66 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK11Q8NG66 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.42■■□□□ 1.98
NEK11Q8NG66 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.42■■□□□ 1.98
NEK11Q8NG66 AC018358.1-201ENST00000631079 1402 ntBASIC27.41■■□□□ 1.98
NEK11Q8NG66 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.41■■□□□ 1.98
NEK11Q8NG66 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
NEK11Q8NG66 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms