Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
LINC00346Q8IVM7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LINC00346Q8IVM7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LINC00346Q8IVM7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LINC00346Q8IVM7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
LINC00346Q8IVM7 LINC01003-201ENST00000564834 1764 ntBASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 AL121749.1-202ENST00000609313 2153 ntBASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.4■■□□□ 1.18
LINC00346Q8IVM7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LINC00346Q8IVM7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.39■■□□□ 1.17
LINC00346Q8IVM7 AC044849.2-201ENST00000606596 710 ntBASIC22.39■■□□□ 1.17
LINC00346Q8IVM7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
LINC00346Q8IVM7 AP002414.2-202ENST00000590929 1450 ntBASIC22.39■■□□□ 1.17
LINC00346Q8IVM7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
LINC00346Q8IVM7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
LINC00346Q8IVM7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LINC00346Q8IVM7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
LINC00346Q8IVM7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
LINC00346Q8IVM7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LINC00346Q8IVM7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
LINC00346Q8IVM7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LINC00346Q8IVM7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LINC00346Q8IVM7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
LINC00346Q8IVM7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
LINC00346Q8IVM7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LINC00346Q8IVM7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.35■■□□□ 1.17
LINC00346Q8IVM7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LINC00346Q8IVM7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LINC00346Q8IVM7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LINC00346Q8IVM7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LINC00346Q8IVM7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.33■■□□□ 1.17
LINC00346Q8IVM7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LINC00346Q8IVM7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.33■■□□□ 1.16
LINC00346Q8IVM7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LINC00346Q8IVM7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LINC00346Q8IVM7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.32■■□□□ 1.16
LINC00346Q8IVM7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
LINC00346Q8IVM7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
LINC00346Q8IVM7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LINC00346Q8IVM7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.31■■□□□ 1.16
LINC00346Q8IVM7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LINC00346Q8IVM7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.31■■□□□ 1.16
LINC00346Q8IVM7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LINC00346Q8IVM7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.3■■□□□ 1.16
LINC00346Q8IVM7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
LINC00346Q8IVM7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LINC00346Q8IVM7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINC00346Q8IVM7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINC00346Q8IVM7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINC00346Q8IVM7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINC00346Q8IVM7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
LINC00346Q8IVM7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINC00346Q8IVM7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINC00346Q8IVM7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.28■■□□□ 1.16
LINC00346Q8IVM7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.28■■□□□ 1.16
LINC00346Q8IVM7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
LINC00346Q8IVM7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
LINC00346Q8IVM7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.28■■□□□ 1.16
LINC00346Q8IVM7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.27■■□□□ 1.16
LINC00346Q8IVM7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC00346Q8IVM7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 AC021231.2-201ENST00000594613 730 ntBASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC00346Q8IVM7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINC00346Q8IVM7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINC00346Q8IVM7 RPS2P35-201ENST00000443417 897 ntBASIC22.24■■□□□ 1.15
LINC00346Q8IVM7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINC00346Q8IVM7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LINC00346Q8IVM7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINC00346Q8IVM7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINC00346Q8IVM7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LINC00346Q8IVM7 AC018358.1-201ENST00000631079 1402 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms