Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
VRK2Q86Y07 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.49■■□□□ 1.35
VRK2Q86Y07 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.49■■□□□ 1.35
VRK2Q86Y07 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VRK2Q86Y07 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VRK2Q86Y07 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
VRK2Q86Y07 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
VRK2Q86Y07 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VRK2Q86Y07 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.47■■□□□ 1.35
VRK2Q86Y07 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.47■■□□□ 1.35
VRK2Q86Y07 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
VRK2Q86Y07 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
VRK2Q86Y07 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
VRK2Q86Y07 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VRK2Q86Y07 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.45■■□□□ 1.34
VRK2Q86Y07 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VRK2Q86Y07 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VRK2Q86Y07 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VRK2Q86Y07 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VRK2Q86Y07 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
VRK2Q86Y07 AC044849.2-201ENST00000606596 710 ntBASIC23.44■■□□□ 1.34
VRK2Q86Y07 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
VRK2Q86Y07 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VRK2Q86Y07 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VRK2Q86Y07 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
VRK2Q86Y07 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.42■■□□□ 1.34
VRK2Q86Y07 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
VRK2Q86Y07 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.41■■□□□ 1.34
VRK2Q86Y07 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VRK2Q86Y07 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
VRK2Q86Y07 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.41■■□□□ 1.34
VRK2Q86Y07 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VRK2Q86Y07 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
VRK2Q86Y07 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.4■■□□□ 1.34
VRK2Q86Y07 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.4■■□□□ 1.34
VRK2Q86Y07 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VRK2Q86Y07 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.39■■□□□ 1.33
VRK2Q86Y07 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VRK2Q86Y07 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.39■■□□□ 1.33
VRK2Q86Y07 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
VRK2Q86Y07 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
VRK2Q86Y07 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VRK2Q86Y07 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VRK2Q86Y07 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.38■■□□□ 1.33
VRK2Q86Y07 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VRK2Q86Y07 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VRK2Q86Y07 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
VRK2Q86Y07 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VRK2Q86Y07 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VRK2Q86Y07 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
VRK2Q86Y07 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
VRK2Q86Y07 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VRK2Q86Y07 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VRK2Q86Y07 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VRK2Q86Y07 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.36■■□□□ 1.33
VRK2Q86Y07 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.36■■□□□ 1.33
VRK2Q86Y07 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VRK2Q86Y07 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VRK2Q86Y07 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
VRK2Q86Y07 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VRK2Q86Y07 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VRK2Q86Y07 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VRK2Q86Y07 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VRK2Q86Y07 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VRK2Q86Y07 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VRK2Q86Y07 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VRK2Q86Y07 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
VRK2Q86Y07 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
VRK2Q86Y07 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VRK2Q86Y07 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
VRK2Q86Y07 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
VRK2Q86Y07 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VRK2Q86Y07 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VRK2Q86Y07 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.33■■□□□ 1.33
VRK2Q86Y07 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.33■■□□□ 1.33
VRK2Q86Y07 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VRK2Q86Y07 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VRK2Q86Y07 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
VRK2Q86Y07 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.32■■□□□ 1.32
VRK2Q86Y07 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.32■■□□□ 1.32
VRK2Q86Y07 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.32■■□□□ 1.32
VRK2Q86Y07 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
VRK2Q86Y07 AC018358.1-201ENST00000631079 1402 ntBASIC23.32■■□□□ 1.32
VRK2Q86Y07 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VRK2Q86Y07 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.31■■□□□ 1.32
VRK2Q86Y07 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
VRK2Q86Y07 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VRK2Q86Y07 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.3■■□□□ 1.32
VRK2Q86Y07 AC021231.2-201ENST00000594613 730 ntBASIC23.3■■□□□ 1.32
VRK2Q86Y07 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VRK2Q86Y07 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.29■■□□□ 1.32
VRK2Q86Y07 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VRK2Q86Y07 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
VRK2Q86Y07 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VRK2Q86Y07 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VRK2Q86Y07 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
VRK2Q86Y07 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VRK2Q86Y07 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VRK2Q86Y07 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VRK2Q86Y07 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms