Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 AC005837.3-201ENST00000612163 286 ntBASIC14.5□□□□□ -0.09
UBR4Q5T4S7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBR4Q5T4S7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBR4Q5T4S7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.49□□□□□ -0.09
UBR4Q5T4S7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC14.49□□□□□ -0.09
UBR4Q5T4S7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBR4Q5T4S7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBR4Q5T4S7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
UBR4Q5T4S7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
UBR4Q5T4S7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBR4Q5T4S7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.48□□□□□ -0.09
UBR4Q5T4S7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.47□□□□□ -0.09
UBR4Q5T4S7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBR4Q5T4S7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.47□□□□□ -0.09
UBR4Q5T4S7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBR4Q5T4S7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBR4Q5T4S7 AC239859.2-201ENST00000444165 318 ntBASIC14.47□□□□□ -0.09
UBR4Q5T4S7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBR4Q5T4S7 MIR5787-201ENST00000611784 55 ntBASIC14.46□□□□□ -0.09
UBR4Q5T4S7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBR4Q5T4S7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.46□□□□□ -0.1
UBR4Q5T4S7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.46□□□□□ -0.1
UBR4Q5T4S7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBR4Q5T4S7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBR4Q5T4S7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBR4Q5T4S7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBR4Q5T4S7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.45□□□□□ -0.1
UBR4Q5T4S7 ZNRF2P3-201ENST00000424200 374 ntBASIC14.44□□□□□ -0.1
UBR4Q5T4S7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBR4Q5T4S7 AC026271.2-201ENST00000428091 497 ntBASIC14.44□□□□□ -0.1
UBR4Q5T4S7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBR4Q5T4S7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBR4Q5T4S7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.44□□□□□ -0.1
UBR4Q5T4S7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.44□□□□□ -0.1
UBR4Q5T4S7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
UBR4Q5T4S7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.43□□□□□ -0.1
UBR4Q5T4S7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.43□□□□□ -0.1
UBR4Q5T4S7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBR4Q5T4S7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC14.43□□□□□ -0.1
UBR4Q5T4S7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.42□□□□□ -0.1
UBR4Q5T4S7 AC103724.3-201ENST00000564481 992 ntBASIC14.42□□□□□ -0.1
UBR4Q5T4S7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBR4Q5T4S7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBR4Q5T4S7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBR4Q5T4S7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBR4Q5T4S7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBR4Q5T4S7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.42□□□□□ -0.1
UBR4Q5T4S7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBR4Q5T4S7 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.41□□□□□ -0.1
UBR4Q5T4S7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBR4Q5T4S7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBR4Q5T4S7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBR4Q5T4S7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UBR4Q5T4S7 DUX4L9-201ENST00000449051 1259 ntBASIC14.41□□□□□ -0.1
UBR4Q5T4S7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBR4Q5T4S7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBR4Q5T4S7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.4□□□□□ -0.1
UBR4Q5T4S7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.4□□□□□ -0.1
UBR4Q5T4S7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBR4Q5T4S7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBR4Q5T4S7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBR4Q5T4S7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UBR4Q5T4S7 AC090192.1-201ENST00000517740 490 ntBASIC14.39□□□□□ -0.11
UBR4Q5T4S7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.39□□□□□ -0.11
UBR4Q5T4S7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.39□□□□□ -0.11
UBR4Q5T4S7 YBX1P4-201ENST00000392794 808 ntBASIC14.38□□□□□ -0.11
UBR4Q5T4S7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBR4Q5T4S7 AC007029.1-201ENST00000604183 313 ntBASIC14.38□□□□□ -0.11
UBR4Q5T4S7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBR4Q5T4S7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBR4Q5T4S7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UBR4Q5T4S7 AC133552.2-201ENST00000619106 1032 ntBASIC14.38□□□□□ -0.11
UBR4Q5T4S7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.38□□□□□ -0.11
UBR4Q5T4S7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
UBR4Q5T4S7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.38□□□□□ -0.11
UBR4Q5T4S7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UBR4Q5T4S7 SMPD5-203ENST00000639008 1464 ntBASIC14.37□□□□□ -0.11
UBR4Q5T4S7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBR4Q5T4S7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.37□□□□□ -0.11
UBR4Q5T4S7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.37□□□□□ -0.11
UBR4Q5T4S7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBR4Q5T4S7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UBR4Q5T4S7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBR4Q5T4S7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBR4Q5T4S7 AC009831.1-201ENST00000580420 1582 ntBASIC14.36□□□□□ -0.11
UBR4Q5T4S7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.36□□□□□ -0.11
UBR4Q5T4S7 AC135279.3-201ENST00000610945 1311 ntBASIC14.36□□□□□ -0.11
UBR4Q5T4S7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBR4Q5T4S7 Z92544.1-202ENST00000571933 1220 ntBASIC14.35□□□□□ -0.11
UBR4Q5T4S7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.35□□□□□ -0.11
UBR4Q5T4S7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.35□□□□□ -0.11
UBR4Q5T4S7 AC026202.3-201ENST00000600805 1127 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms