Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RPS27AP62979 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS27AP62979 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.71■■□□□ 1.07
RPS27AP62979 AC136428.2-201ENST00000563187 214 ntBASIC21.71■■□□□ 1.07
RPS27AP62979 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS27AP62979 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS27AP62979 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS27AP62979 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPS27AP62979 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPS27AP62979 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPS27AP62979 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPS27AP62979 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPS27AP62979 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RPS27AP62979 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPS27AP62979 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.67■■□□□ 1.06
RPS27AP62979 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RPS27AP62979 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPS27AP62979 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPS27AP62979 AC097358.2-201ENST00000607541 1159 ntBASIC21.67■■□□□ 1.06
RPS27AP62979 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS27AP62979 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPS27AP62979 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS27AP62979 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS27AP62979 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS27AP62979 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS27AP62979 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS27AP62979 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS27AP62979 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPS27AP62979 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS27AP62979 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.65■■□□□ 1.06
RPS27AP62979 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.65■■□□□ 1.06
RPS27AP62979 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS27AP62979 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS27AP62979 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RPS27AP62979 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS27AP62979 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.65■■□□□ 1.06
RPS27AP62979 AP002414.2-202ENST00000590929 1450 ntBASIC21.64■■□□□ 1.06
RPS27AP62979 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.64■■□□□ 1.05
RPS27AP62979 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RPS27AP62979 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPS27AP62979 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPS27AP62979 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPS27AP62979 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPS27AP62979 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPS27AP62979 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RPS27AP62979 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.62■■□□□ 1.05
RPS27AP62979 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPS27AP62979 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.62■■□□□ 1.05
RPS27AP62979 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.62■■□□□ 1.05
RPS27AP62979 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS27AP62979 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPS27AP62979 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RPS27AP62979 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPS27AP62979 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPS27AP62979 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.61■■□□□ 1.05
RPS27AP62979 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.61■■□□□ 1.05
RPS27AP62979 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RPS27AP62979 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPS27AP62979 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.6■■□□□ 1.05
RPS27AP62979 MIR762-201ENST00000390236 83 ntBASIC21.59■■□□□ 1.05
RPS27AP62979 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.59■■□□□ 1.05
RPS27AP62979 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPS27AP62979 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPS27AP62979 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RPS27AP62979 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPS27AP62979 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.58■■□□□ 1.05
RPS27AP62979 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RPS27AP62979 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPS27AP62979 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.57■■□□□ 1.04
RPS27AP62979 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RPS27AP62979 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RPS27AP62979 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPS27AP62979 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.57■■□□□ 1.04
RPS27AP62979 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.56■■□□□ 1.04
RPS27AP62979 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.56■■□□□ 1.04
RPS27AP62979 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RPS27AP62979 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.56■■□□□ 1.04
RPS27AP62979 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.55■■□□□ 1.04
RPS27AP62979 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RPS27AP62979 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.55■■□□□ 1.04
RPS27AP62979 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.55■■□□□ 1.04
RPS27AP62979 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPS27AP62979 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPS27AP62979 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.54■■□□□ 1.04
RPS27AP62979 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.54■■□□□ 1.04
RPS27AP62979 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.54■■□□□ 1.04
RPS27AP62979 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPS27AP62979 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPS27AP62979 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.53■■□□□ 1.04
RPS27AP62979 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPS27AP62979 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPS27AP62979 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPS27AP62979 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPS27AP62979 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPS27AP62979 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
RPS27AP62979 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
RPS27AP62979 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.51■■□□□ 1.03
RPS27AP62979 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.51■■□□□ 1.03
RPS27AP62979 AC018358.1-201ENST00000631079 1402 ntBASIC21.5■■□□□ 1.03
RPS27AP62979 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms