Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.13■■□□□ 1.45
WNT3P56703 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.13■■□□□ 1.45
WNT3P56703 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.13■■□□□ 1.45
WNT3P56703 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.13■■□□□ 1.45
WNT3P56703 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
WNT3P56703 AP002414.2-202ENST00000590929 1450 ntBASIC24.13■■□□□ 1.45
WNT3P56703 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.12■■□□□ 1.45
WNT3P56703 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
WNT3P56703 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
WNT3P56703 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
WNT3P56703 AC108673.1-201ENST00000510422 1159 ntBASIC24.11■■□□□ 1.45
WNT3P56703 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
WNT3P56703 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
WNT3P56703 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
WNT3P56703 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
WNT3P56703 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
WNT3P56703 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.09■■□□□ 1.45
WNT3P56703 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
WNT3P56703 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
WNT3P56703 AC044849.2-201ENST00000606596 710 ntBASIC24.09■■□□□ 1.45
WNT3P56703 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.08■■□□□ 1.45
WNT3P56703 WHAMMP2-203ENST00000563942 1603 ntBASIC24.08■■□□□ 1.45
WNT3P56703 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
WNT3P56703 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
WNT3P56703 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
WNT3P56703 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
WNT3P56703 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
WNT3P56703 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
WNT3P56703 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
WNT3P56703 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.07■■□□□ 1.44
WNT3P56703 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
WNT3P56703 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
WNT3P56703 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
WNT3P56703 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
WNT3P56703 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.04■■□□□ 1.44
WNT3P56703 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
WNT3P56703 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
WNT3P56703 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
WNT3P56703 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
WNT3P56703 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.03■■□□□ 1.44
WNT3P56703 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
WNT3P56703 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
WNT3P56703 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
WNT3P56703 LINC00273-201ENST00000539813 1452 ntBASIC24.02■■□□□ 1.44
WNT3P56703 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.02■■□□□ 1.44
WNT3P56703 ABHD17AP4-201ENST00000411545 909 ntBASIC24.02■■□□□ 1.44
WNT3P56703 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
WNT3P56703 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
WNT3P56703 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
WNT3P56703 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.01■■□□□ 1.43
WNT3P56703 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
WNT3P56703 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
WNT3P56703 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.99■■□□□ 1.43
WNT3P56703 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
WNT3P56703 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
WNT3P56703 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
WNT3P56703 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
WNT3P56703 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
WNT3P56703 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
WNT3P56703 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.97■■□□□ 1.43
WNT3P56703 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
WNT3P56703 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
WNT3P56703 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
WNT3P56703 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
WNT3P56703 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
WNT3P56703 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.96■■□□□ 1.43
WNT3P56703 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
WNT3P56703 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.96■■□□□ 1.43
WNT3P56703 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.96■■□□□ 1.43
WNT3P56703 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
WNT3P56703 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
WNT3P56703 AC018358.1-201ENST00000631079 1402 ntBASIC23.95■■□□□ 1.42
WNT3P56703 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
WNT3P56703 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.95■■□□□ 1.42
WNT3P56703 MIR7108-201ENST00000614319 87 ntBASIC23.95■■□□□ 1.42
WNT3P56703 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
WNT3P56703 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
WNT3P56703 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.94■■□□□ 1.42
WNT3P56703 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
WNT3P56703 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
WNT3P56703 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.93■■□□□ 1.42
WNT3P56703 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
WNT3P56703 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
WNT3P56703 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
WNT3P56703 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
WNT3P56703 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.92■■□□□ 1.42
WNT3P56703 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
WNT3P56703 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
WNT3P56703 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.91■■□□□ 1.42
WNT3P56703 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
WNT3P56703 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.91■■□□□ 1.42
WNT3P56703 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
WNT3P56703 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
WNT3P56703 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.9■■□□□ 1.42
WNT3P56703 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.89■■□□□ 1.42
WNT3P56703 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
WNT3P56703 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.89■■□□□ 1.42
WNT3P56703 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.89■■□□□ 1.41
WNT3P56703 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.89■■□□□ 1.41
WNT3P56703 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms