Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
H2BFMP0C1H6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2BFMP0C1H6 AC135983.2-203ENST00000454486 1613 ntBASIC22.32■■□□□ 1.16
H2BFMP0C1H6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.32■■□□□ 1.16
H2BFMP0C1H6 AP002414.2-202ENST00000590929 1450 ntBASIC22.32■■□□□ 1.16
H2BFMP0C1H6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2BFMP0C1H6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
H2BFMP0C1H6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.31■■□□□ 1.16
H2BFMP0C1H6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2BFMP0C1H6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.31■■□□□ 1.16
H2BFMP0C1H6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2BFMP0C1H6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.31■■□□□ 1.16
H2BFMP0C1H6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
H2BFMP0C1H6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
H2BFMP0C1H6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.3■■□□□ 1.16
H2BFMP0C1H6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.3■■□□□ 1.16
H2BFMP0C1H6 AP006261.1-201ENST00000584783 668 ntBASIC22.29■■□□□ 1.16
H2BFMP0C1H6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2BFMP0C1H6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2BFMP0C1H6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2BFMP0C1H6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2BFMP0C1H6 WHAMMP2-203ENST00000563942 1603 ntBASIC22.27■■□□□ 1.16
H2BFMP0C1H6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.26■■□□□ 1.15
H2BFMP0C1H6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.26■■□□□ 1.15
H2BFMP0C1H6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
H2BFMP0C1H6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H2BFMP0C1H6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H2BFMP0C1H6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2BFMP0C1H6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.25■■□□□ 1.15
H2BFMP0C1H6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2BFMP0C1H6 LINC00273-201ENST00000539813 1452 ntBASIC22.25■■□□□ 1.15
H2BFMP0C1H6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2BFMP0C1H6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.24■■□□□ 1.15
H2BFMP0C1H6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
H2BFMP0C1H6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
H2BFMP0C1H6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.23■■□□□ 1.15
H2BFMP0C1H6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2BFMP0C1H6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.22■■□□□ 1.15
H2BFMP0C1H6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
H2BFMP0C1H6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.22■■□□□ 1.15
H2BFMP0C1H6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
H2BFMP0C1H6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
H2BFMP0C1H6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
H2BFMP0C1H6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
H2BFMP0C1H6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
H2BFMP0C1H6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
H2BFMP0C1H6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
H2BFMP0C1H6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
H2BFMP0C1H6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2BFMP0C1H6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2BFMP0C1H6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2BFMP0C1H6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2BFMP0C1H6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2BFMP0C1H6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2BFMP0C1H6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
H2BFMP0C1H6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
H2BFMP0C1H6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 AC087741.3-201ENST00000624270 1347 ntBASIC22.17■■□□□ 1.14
H2BFMP0C1H6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2BFMP0C1H6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2BFMP0C1H6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2BFMP0C1H6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2BFMP0C1H6 AC018358.1-201ENST00000631079 1402 ntBASIC22.15■■□□□ 1.14
H2BFMP0C1H6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2BFMP0C1H6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2BFMP0C1H6 AL162393.1-201ENST00000437852 946 ntBASIC22.14■■□□□ 1.13
H2BFMP0C1H6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.14■■□□□ 1.13
H2BFMP0C1H6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.14■■□□□ 1.13
H2BFMP0C1H6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.14■■□□□ 1.13
H2BFMP0C1H6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.14■■□□□ 1.13
H2BFMP0C1H6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.14■■□□□ 1.13
H2BFMP0C1H6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.13■■□□□ 1.13
H2BFMP0C1H6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
H2BFMP0C1H6 AC044849.2-201ENST00000606596 710 ntBASIC22.13■■□□□ 1.13
H2BFMP0C1H6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.13■■□□□ 1.13
H2BFMP0C1H6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
H2BFMP0C1H6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
H2BFMP0C1H6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.12■■□□□ 1.13
H2BFMP0C1H6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
H2BFMP0C1H6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
H2BFMP0C1H6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
H2BFMP0C1H6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.12■■□□□ 1.13
H2BFMP0C1H6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
H2BFMP0C1H6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
H2BFMP0C1H6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
H2BFMP0C1H6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms