Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF253O75346 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF253O75346 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF253O75346 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF253O75346 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF253O75346 AC127502.1-201ENST00000399971 1502 ntBASIC19.51■□□□□ 0.71
ZNF253O75346 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF253O75346 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.51■□□□□ 0.71
ZNF253O75346 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF253O75346 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF253O75346 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF253O75346 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF253O75346 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF253O75346 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ZNF253O75346 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF253O75346 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF253O75346 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF253O75346 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ZNF253O75346 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ZNF253O75346 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF253O75346 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF253O75346 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF253O75346 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF253O75346 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF253O75346 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF253O75346 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF253O75346 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ZNF253O75346 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF253O75346 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF253O75346 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF253O75346 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF253O75346 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF253O75346 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF253O75346 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF253O75346 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF253O75346 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF253O75346 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF253O75346 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF253O75346 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF253O75346 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF253O75346 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF253O75346 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF253O75346 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF253O75346 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF253O75346 CAHM-201ENST00000604200 896 ntBASIC19.43■□□□□ 0.7
ZNF253O75346 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF253O75346 LINC01003-201ENST00000564834 1764 ntBASIC19.42■□□□□ 0.7
ZNF253O75346 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF253O75346 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF253O75346 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF253O75346 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF253O75346 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF253O75346 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF253O75346 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF253O75346 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF253O75346 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF253O75346 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNF253O75346 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF253O75346 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF253O75346 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF253O75346 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF253O75346 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF253O75346 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF253O75346 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNF253O75346 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.39■□□□□ 0.7
ZNF253O75346 AL449106.1-201ENST00000608517 1980 ntBASIC19.39■□□□□ 0.7
ZNF253O75346 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ZNF253O75346 AC136428.2-201ENST00000563187 214 ntBASIC19.39■□□□□ 0.69
ZNF253O75346 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF253O75346 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ZNF253O75346 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF253O75346 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF253O75346 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF253O75346 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZNF253O75346 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF253O75346 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
ZNF253O75346 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF253O75346 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF253O75346 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF253O75346 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF253O75346 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF253O75346 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF253O75346 AC097358.2-201ENST00000607541 1159 ntBASIC19.36■□□□□ 0.69
ZNF253O75346 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF253O75346 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF253O75346 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF253O75346 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF253O75346 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZNF253O75346 AP002414.2-202ENST00000590929 1450 ntBASIC19.35■□□□□ 0.69
ZNF253O75346 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF253O75346 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF253O75346 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ZNF253O75346 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ZNF253O75346 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF253O75346 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF253O75346 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF253O75346 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ZNF253O75346 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF253O75346 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF253O75346 AC100797.4-201ENST00000631653 1827 ntBASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms