Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SLC33A1O00400 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC33A1O00400 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC33A1O00400 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC33A1O00400 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC33A1O00400 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC33A1O00400 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC33A1O00400 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC33A1O00400 AC135983.2-203ENST00000454486 1613 ntBASIC21.44■■□□□ 1.02
SLC33A1O00400 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC33A1O00400 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC33A1O00400 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SLC33A1O00400 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC33A1O00400 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SLC33A1O00400 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC33A1O00400 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SLC33A1O00400 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC33A1O00400 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC33A1O00400 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC33A1O00400 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC33A1O00400 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC33A1O00400 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.42■■□□□ 1.02
SLC33A1O00400 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC33A1O00400 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC33A1O00400 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC33A1O00400 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC33A1O00400 LINC00273-201ENST00000539813 1452 ntBASIC21.4■■□□□ 1.02
SLC33A1O00400 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC33A1O00400 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC33A1O00400 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC33A1O00400 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC33A1O00400 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC33A1O00400 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC33A1O00400 WHAMMP2-203ENST00000563942 1603 ntBASIC21.4■■□□□ 1.02
SLC33A1O00400 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC33A1O00400 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC33A1O00400 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC33A1O00400 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC33A1O00400 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC33A1O00400 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SLC33A1O00400 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC33A1O00400 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SLC33A1O00400 BX255925.1-201ENST00000566954 1854 ntBASIC21.37■■□□□ 1.01
SLC33A1O00400 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC33A1O00400 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC33A1O00400 AC044849.2-201ENST00000606596 710 ntBASIC21.37■■□□□ 1.01
SLC33A1O00400 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC33A1O00400 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC33A1O00400 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
SLC33A1O00400 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC33A1O00400 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC33A1O00400 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC33A1O00400 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC33A1O00400 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC33A1O00400 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SLC33A1O00400 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLC33A1O00400 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC33A1O00400 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC33A1O00400 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC33A1O00400 AP002414.2-202ENST00000590929 1450 ntBASIC21.34■■□□□ 1.01
SLC33A1O00400 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.34■■□□□ 1.01
SLC33A1O00400 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
SLC33A1O00400 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
SLC33A1O00400 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC33A1O00400 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC33A1O00400 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.33■■□□□ 1.01
SLC33A1O00400 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC33A1O00400 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC33A1O00400 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.33■■□□□ 1.01
SLC33A1O00400 LINC01003-201ENST00000564834 1764 ntBASIC21.33■■□□□ 1
SLC33A1O00400 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC33A1O00400 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC33A1O00400 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC33A1O00400 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SLC33A1O00400 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SLC33A1O00400 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.32■■□□□ 1
SLC33A1O00400 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC33A1O00400 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC33A1O00400 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
SLC33A1O00400 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.31■■□□□ 1
SLC33A1O00400 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC33A1O00400 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.31■■□□□ 1
SLC33A1O00400 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC33A1O00400 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.3■■□□□ 1
SLC33A1O00400 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC33A1O00400 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC33A1O00400 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.29■■□□□ 1
SLC33A1O00400 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC33A1O00400 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC33A1O00400 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC33A1O00400 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.28■■□□□ 1
SLC33A1O00400 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC33A1O00400 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.28■■□□□ 1
SLC33A1O00400 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC33A1O00400 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SLC33A1O00400 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC33A1O00400 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC33A1O00400 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.27■■□□□ 1
SLC33A1O00400 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC33A1O00400 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms