Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.94■□□□□ 0.94
MSGN1A6NI15 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSGN1A6NI15 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.94■□□□□ 0.94
MSGN1A6NI15 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.94■□□□□ 0.94
MSGN1A6NI15 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.94■□□□□ 0.94
MSGN1A6NI15 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSGN1A6NI15 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MSGN1A6NI15 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
MSGN1A6NI15 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.93■□□□□ 0.94
MSGN1A6NI15 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
MSGN1A6NI15 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.93■□□□□ 0.94
MSGN1A6NI15 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.93■□□□□ 0.94
MSGN1A6NI15 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MSGN1A6NI15 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.92■□□□□ 0.94
MSGN1A6NI15 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSGN1A6NI15 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
MSGN1A6NI15 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MSGN1A6NI15 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSGN1A6NI15 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.91■□□□□ 0.94
MSGN1A6NI15 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MSGN1A6NI15 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSGN1A6NI15 LINC01003-201ENST00000564834 1764 ntBASIC20.9■□□□□ 0.94
MSGN1A6NI15 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.9■□□□□ 0.94
MSGN1A6NI15 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSGN1A6NI15 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MSGN1A6NI15 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MSGN1A6NI15 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSGN1A6NI15 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.89■□□□□ 0.93
MSGN1A6NI15 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.89■□□□□ 0.93
MSGN1A6NI15 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MSGN1A6NI15 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSGN1A6NI15 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MSGN1A6NI15 AC091060.1-201ENST00000623524 1766 ntBASIC20.88■□□□□ 0.93
MSGN1A6NI15 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MSGN1A6NI15 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.88■□□□□ 0.93
MSGN1A6NI15 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MSGN1A6NI15 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.88■□□□□ 0.93
MSGN1A6NI15 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MSGN1A6NI15 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
MSGN1A6NI15 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSGN1A6NI15 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.86■□□□□ 0.93
MSGN1A6NI15 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSGN1A6NI15 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.86■□□□□ 0.93
MSGN1A6NI15 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
MSGN1A6NI15 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MSGN1A6NI15 AC020928.2-201ENST00000588717 2197 ntBASIC20.86■□□□□ 0.93
MSGN1A6NI15 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MSGN1A6NI15 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.86■□□□□ 0.93
MSGN1A6NI15 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSGN1A6NI15 AC010864.1-201ENST00000609407 1511 ntBASIC20.85■□□□□ 0.93
MSGN1A6NI15 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSGN1A6NI15 SUZ12P1-203ENST00000578195 985 ntBASIC20.85■□□□□ 0.93
MSGN1A6NI15 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.85■□□□□ 0.93
MSGN1A6NI15 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.85■□□□□ 0.93
MSGN1A6NI15 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MSGN1A6NI15 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
MSGN1A6NI15 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.85■□□□□ 0.93
MSGN1A6NI15 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.85■□□□□ 0.93
MSGN1A6NI15 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MSGN1A6NI15 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MSGN1A6NI15 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSGN1A6NI15 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MSGN1A6NI15 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MSGN1A6NI15 MIR762-201ENST00000390236 83 ntBASIC20.83■□□□□ 0.93
MSGN1A6NI15 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.83■□□□□ 0.93
MSGN1A6NI15 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MSGN1A6NI15 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSGN1A6NI15 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.82■□□□□ 0.92
MSGN1A6NI15 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MSGN1A6NI15 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSGN1A6NI15 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MSGN1A6NI15 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.81■□□□□ 0.92
MSGN1A6NI15 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MSGN1A6NI15 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.81■□□□□ 0.92
MSGN1A6NI15 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MSGN1A6NI15 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSGN1A6NI15 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MSGN1A6NI15 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
MSGN1A6NI15 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
MSGN1A6NI15 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSGN1A6NI15 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.79■□□□□ 0.92
MSGN1A6NI15 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MSGN1A6NI15 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MSGN1A6NI15 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MSGN1A6NI15 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MSGN1A6NI15 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MSGN1A6NI15 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.78■□□□□ 0.92
MSGN1A6NI15 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.78■□□□□ 0.92
MSGN1A6NI15 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
MSGN1A6NI15 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MSGN1A6NI15 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.78■□□□□ 0.92
MSGN1A6NI15 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSGN1A6NI15 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MSGN1A6NI15 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MSGN1A6NI15 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSGN1A6NI15 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MSGN1A6NI15 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.77■□□□□ 0.92
MSGN1A6NI15 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MSGN1A6NI15 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MSGN1A6NI15 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms