Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
MSGN1A6NI15 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.43■■□□□ 1.98
MSGN1A6NI15 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
MSGN1A6NI15 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
MSGN1A6NI15 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
MSGN1A6NI15 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
MSGN1A6NI15 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
MSGN1A6NI15 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.5■■□□□ 1.83
MSGN1A6NI15 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
MSGN1A6NI15 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.38■■□□□ 1.81
MSGN1A6NI15 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.36■■□□□ 1.81
MSGN1A6NI15 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
MSGN1A6NI15 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
MSGN1A6NI15 AL356512.1-201ENST00000607453 1739 ntBASIC26.3■■□□□ 1.8
MSGN1A6NI15 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.26■■□□□ 1.79
MSGN1A6NI15 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MSGN1A6NI15 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
MSGN1A6NI15 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
MSGN1A6NI15 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
MSGN1A6NI15 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
MSGN1A6NI15 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
MSGN1A6NI15 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.85■■□□□ 1.73
MSGN1A6NI15 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
MSGN1A6NI15 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
MSGN1A6NI15 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
MSGN1A6NI15 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC25.49■■□□□ 1.67
MSGN1A6NI15 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSGN1A6NI15 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MSGN1A6NI15 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.35■■□□□ 1.65
MSGN1A6NI15 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MSGN1A6NI15 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
MSGN1A6NI15 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
MSGN1A6NI15 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MSGN1A6NI15 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MSGN1A6NI15 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
MSGN1A6NI15 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
MSGN1A6NI15 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
MSGN1A6NI15 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
MSGN1A6NI15 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
MSGN1A6NI15 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
MSGN1A6NI15 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
MSGN1A6NI15 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
MSGN1A6NI15 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
MSGN1A6NI15 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
MSGN1A6NI15 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
MSGN1A6NI15 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
MSGN1A6NI15 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.75■■□□□ 1.55
MSGN1A6NI15 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.54
MSGN1A6NI15 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
MSGN1A6NI15 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
MSGN1A6NI15 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
MSGN1A6NI15 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
MSGN1A6NI15 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
MSGN1A6NI15 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
MSGN1A6NI15 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
MSGN1A6NI15 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.56■■□□□ 1.52
MSGN1A6NI15 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
MSGN1A6NI15 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.53■■□□□ 1.52
MSGN1A6NI15 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MSGN1A6NI15 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
MSGN1A6NI15 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MSGN1A6NI15 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MSGN1A6NI15 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
MSGN1A6NI15 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MSGN1A6NI15 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
MSGN1A6NI15 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
MSGN1A6NI15 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MSGN1A6NI15 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MSGN1A6NI15 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.37■■□□□ 1.49
MSGN1A6NI15 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.36■■□□□ 1.49
MSGN1A6NI15 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC24.35■■□□□ 1.49
MSGN1A6NI15 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.33■■□□□ 1.49
MSGN1A6NI15 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.3■■□□□ 1.48
MSGN1A6NI15 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.3■■□□□ 1.48
MSGN1A6NI15 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
MSGN1A6NI15 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
MSGN1A6NI15 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.17■■□□□ 1.46
MSGN1A6NI15 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MSGN1A6NI15 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.12■■□□□ 1.45
MSGN1A6NI15 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.12■■□□□ 1.45
MSGN1A6NI15 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
MSGN1A6NI15 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
MSGN1A6NI15 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
MSGN1A6NI15 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.11■■□□□ 1.45
MSGN1A6NI15 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSGN1A6NI15 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
MSGN1A6NI15 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
MSGN1A6NI15 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
MSGN1A6NI15 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
MSGN1A6NI15 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSGN1A6NI15 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSGN1A6NI15 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.04■■□□□ 1.44
MSGN1A6NI15 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSGN1A6NI15 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.02■■□□□ 1.44
MSGN1A6NI15 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.01■■□□□ 1.43
MSGN1A6NI15 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
MSGN1A6NI15 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MSGN1A6NI15 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MSGN1A6NI15 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
MSGN1A6NI15 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms