Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.32■□□□□ 0.52
TRGV1A0A0A0MS02 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV1A0A0A0MS02 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV1A0A0A0MS02 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV1A0A0A0MS02 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.31■□□□□ 0.52
TRGV1A0A0A0MS02 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV1A0A0A0MS02 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.31■□□□□ 0.52
TRGV1A0A0A0MS02 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV1A0A0A0MS02 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 DUX4L29-201ENST00000425409 679 ntBASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.3■□□□□ 0.52
TRGV1A0A0A0MS02 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRGV1A0A0A0MS02 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRGV1A0A0A0MS02 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.29■□□□□ 0.52
TRGV1A0A0A0MS02 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.29■□□□□ 0.52
TRGV1A0A0A0MS02 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRGV1A0A0A0MS02 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.29■□□□□ 0.52
TRGV1A0A0A0MS02 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.29■□□□□ 0.52
TRGV1A0A0A0MS02 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.28■□□□□ 0.52
TRGV1A0A0A0MS02 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV1A0A0A0MS02 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.28■□□□□ 0.52
TRGV1A0A0A0MS02 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.28■□□□□ 0.52
TRGV1A0A0A0MS02 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRGV1A0A0A0MS02 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV1A0A0A0MS02 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV1A0A0A0MS02 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV1A0A0A0MS02 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV1A0A0A0MS02 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV1A0A0A0MS02 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV1A0A0A0MS02 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV1A0A0A0MS02 AC021231.2-201ENST00000594613 730 ntBASIC18.26■□□□□ 0.51
TRGV1A0A0A0MS02 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.26■□□□□ 0.51
TRGV1A0A0A0MS02 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV1A0A0A0MS02 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV1A0A0A0MS02 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV1A0A0A0MS02 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV1A0A0A0MS02 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV1A0A0A0MS02 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV1A0A0A0MS02 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRGV1A0A0A0MS02 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV1A0A0A0MS02 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV1A0A0A0MS02 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV1A0A0A0MS02 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRGV1A0A0A0MS02 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV1A0A0A0MS02 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV1A0A0A0MS02 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRGV1A0A0A0MS02 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.23■□□□□ 0.51
TRGV1A0A0A0MS02 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV1A0A0A0MS02 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV1A0A0A0MS02 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRGV1A0A0A0MS02 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRGV1A0A0A0MS02 AP002414.2-202ENST00000590929 1450 ntBASIC18.22■□□□□ 0.51
TRGV1A0A0A0MS02 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV1A0A0A0MS02 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV1A0A0A0MS02 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV1A0A0A0MS02 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV1A0A0A0MS02 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.21■□□□□ 0.51
TRGV1A0A0A0MS02 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV1A0A0A0MS02 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRGV1A0A0A0MS02 BX255925.1-201ENST00000566954 1854 ntBASIC18.2■□□□□ 0.5
TRGV1A0A0A0MS02 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV1A0A0A0MS02 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.2■□□□□ 0.5
TRGV1A0A0A0MS02 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV1A0A0A0MS02 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.2■□□□□ 0.5
TRGV1A0A0A0MS02 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.2■□□□□ 0.5
TRGV1A0A0A0MS02 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV1A0A0A0MS02 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV1A0A0A0MS02 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.19■□□□□ 0.5
TRGV1A0A0A0MS02 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
TRGV1A0A0A0MS02 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV1A0A0A0MS02 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.18■□□□□ 0.5
TRGV1A0A0A0MS02 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRGV1A0A0A0MS02 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.17■□□□□ 0.5
TRGV1A0A0A0MS02 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRGV1A0A0A0MS02 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRGV1A0A0A0MS02 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRGV1A0A0A0MS02 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRGV1A0A0A0MS02 LINC01003-201ENST00000564834 1764 ntBASIC18.17■□□□□ 0.5
TRGV1A0A0A0MS02 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRGV1A0A0A0MS02 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.16■□□□□ 0.5
TRGV1A0A0A0MS02 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV1A0A0A0MS02 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV1A0A0A0MS02 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms