Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SLC38A10-206ENST00000540966 896 ntTSL 315.4■□□□□ 0.061e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-213ENST00000532085 5862 ntTSL 1 (best)15.32■□□□□ 0.041e-6■■□□□ 13.6
LARP4Q71RC2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.041e-6■■□□□ 13.6
LARP4Q71RC2 EIF2B4-202ENST00000405940 1570 ntTSL 1 (best)15.16■□□□□ 0.021e-6■■□□□ 13.6
LARP4Q71RC2 CDC37-203ENST00000588869 966 ntTSL 515.12■□□□□ 0.011e-6■■□□□ 13.6
LARP4Q71RC2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.011e-6■■□□□ 13.6
LARP4Q71RC2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.031e-6■■□□□ 13.6
LARP4Q71RC2 HEXA-202ENST00000563762 1174 ntTSL 214.83□□□□□ -0.041e-6■■□□□ 13.6
LARP4Q71RC2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.48□□□□□ -0.091e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.35□□□□□ -0.111e-6■■□□□ 13.6
LARP4Q71RC2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.133e-9■■□□□ 13.6
LARP4Q71RC2 SLC37A4-219ENST00000638360 1912 ntTSL 514.2□□□□□ -0.141e-6■■□□□ 13.6
LARP4Q71RC2 MRPL53-204ENST00000468875 574 ntTSL 214.2□□□□□ -0.141e-6■■□□□ 13.6
LARP4Q71RC2 SLC38A10-211ENST00000576151 774 ntTSL 214.18□□□□□ -0.141e-6■■□□□ 13.6
LARP4Q71RC2 CDC37-206ENST00000589629 728 ntTSL 313.87□□□□□ -0.191e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-205ENST00000525102 2844 ntTSL 213.84□□□□□ -0.191e-6■■□□□ 13.6
LARP4Q71RC2 IRF3-211ENST00000596644 550 ntTSL 213.81□□□□□ -0.21e-6■■□□□ 13.6
LARP4Q71RC2 LMAN2L-204ENST00000434865 1163 ntTSL 213.81□□□□□ -0.21e-6■■□□□ 13.6
LARP4Q71RC2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.21e-6■■□□□ 13.6
LARP4Q71RC2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.233e-9■■□□□ 13.6
LARP4Q71RC2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.233e-9■■□□□ 13.6
LARP4Q71RC2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.231e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.55□□□□□ -0.241e-6■■□□□ 13.6
LARP4Q71RC2 CENPA-206ENST00000475662 1208 ntTSL 213.5□□□□□ -0.253e-9■■□□□ 13.6
LARP4Q71RC2 MRPL53-203ENST00000467349 451 ntTSL 213.49□□□□□ -0.251e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.251e-6■■□□□ 13.6
LARP4Q71RC2 LMAN2L-205ENST00000440610 1008 ntTSL 213.46□□□□□ -0.251e-6■■□□□ 13.6
LARP4Q71RC2 LMAN2L-207ENST00000449221 1061 ntTSL 213.46□□□□□ -0.251e-6■■□□□ 13.6
LARP4Q71RC2 AC012254.2-201ENST00000602459 1443 ntAPPRIS ALT2 TSL 513.46□□□□□ -0.261e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-220ENST00000638925 2046 ntTSL 513.32□□□□□ -0.281e-6■■□□□ 13.6
LARP4Q71RC2 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.283e-9■■□□□ 13.6
LARP4Q71RC2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.27□□□□□ -0.291e-6■■□□□ 13.6
LARP4Q71RC2 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.314e-12■■□□□ 13.6
LARP4Q71RC2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.1□□□□□ -0.311e-6■■□□□ 13.6
LARP4Q71RC2 IRF3-224ENST00000599680 472 ntTSL 313.1□□□□□ -0.311e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-210ENST00000527992 2040 ntTSL 1 (best)12.89□□□□□ -0.351e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-218ENST00000638186 2074 ntTSL 512.85□□□□□ -0.351e-6■■□□□ 13.6
LARP4Q71RC2 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.77□□□□□ -0.371e-6■■□□□ 13.6
LARP4Q71RC2 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC12.72□□□□□ -0.371e-6■■□□□ 13.6
LARP4Q71RC2 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.72□□□□□ -0.371e-6■■□□□ 13.6
LARP4Q71RC2 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.413e-9■■□□□ 13.6
LARP4Q71RC2 DBNDD1-207ENST00000623401 2889 nt12.31□□□□□ -0.441e-6■■□□□ 13.6
LARP4Q71RC2 HEXA-207ENST00000566672 1397 ntTSL 212.25□□□□□ -0.451e-6■■□□□ 13.6
LARP4Q71RC2 SLC37A4-208ENST00000526275 2626 ntTSL 1 (best)11.8□□□□□ -0.521e-6■■□□□ 13.6
LARP4Q71RC2 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.571e-6■■□□□ 13.6
LARP4Q71RC2 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.583e-9■■□□□ 13.6
LARP4Q71RC2 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.683e-9■■□□□ 13.6
LARP4Q71RC2 JPT2-202ENST00000382710 962 ntTSL 2 BASIC10.75□□□□□ -0.693e-9■■□□□ 13.6
LARP4Q71RC2 PRR13-208ENST00000549740 786 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.693e-9■■□□□ 13.6
LARP4Q71RC2 SLC35F6-203ENST00000429494 3738 ntTSL 1 (best)10.7□□□□□ -0.73e-9■■□□□ 13.6
LARP4Q71RC2 EIF2B4-209ENST00000478311 607 ntTSL 210.64□□□□□ -0.711e-6■■□□□ 13.6
LARP4Q71RC2 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.711e-6■■□□□ 13.6
LARP4Q71RC2 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.743e-9■■□□□ 13.6
LARP4Q71RC2 AC023509.1-201ENST00000547717 1571 ntTSL 2 BASIC10.43□□□□□ -0.743e-9■■□□□ 13.6
LARP4Q71RC2 COA4-204ENST00000541455 1038 ntTSL 5 BASIC9.99□□□□□ -0.811e-6■■□□□ 13.6
LARP4Q71RC2 ENO2-203ENST00000534977 351 ntTSL 39.88□□□□□ -0.831e-6■■□□□ 13.6
LARP4Q71RC2 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.861e-6■■□□□ 13.6
LARP4Q71RC2 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.891e-6■■□□□ 13.6
LARP4Q71RC2 PRR13-201ENST00000379786 927 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.933e-9■■□□□ 13.6
LARP4Q71RC2 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.941e-6■■□□□ 13.6
LARP4Q71RC2 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.971e-6■■□□□ 13.6
LARP4Q71RC2 SLC35F6-202ENST00000414029 3605 ntTSL 1 (best)8.96□□□□□ -0.973e-9■■□□□ 13.6
LARP4Q71RC2 HEXA-215ENST00000569410 1351 ntTSL 58.83□□□□□ -11e-6■■□□□ 13.6
LARP4Q71RC2 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.013e-9■■□□□ 13.6
LARP4Q71RC2 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.033e-9■■□□□ 13.6
LARP4Q71RC2 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.193e-9■■□□□ 13.6
LARP4Q71RC2 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.193e-9■■□□□ 13.6
LARP4Q71RC2 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.263e-9■■□□□ 13.6
LARP4Q71RC2 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.33e-9■■□□□ 13.6
LARP4Q71RC2 AC012254.2-202ENST00000602926 291 ntAPPRIS ALT2 TSL 26.3□□□□□ -1.41e-6■■□□□ 13.6
LARP4Q71RC2 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.12□□□□□ -1.431e-6■■□□□ 13.6
LARP4Q71RC2 ENO2-213ENST00000543975 416 ntTSL 55.82□□□□□ -1.481e-6■■□□□ 13.6
LARP4Q71RC2 PFDN5-219ENST00000553171 484 ntTSL 1 (best)4.35□□□□□ -1.711e-6■■□□□ 13.6
LARP4Q71RC2 MIR7703-201ENST00000620784 77 ntBASIC4.17□□□□□ -1.743e-9■■□□□ 13.6
LARP4Q71RC2 APOM-202ENST00000375918 922 ntTSL 2 BASIC8.22□□□□□ -1.091e-16■■□□□ 13.6
LARP4Q71RC2 ECI1-206ENST00000566379 961 ntTSL 220.11■□□□□ 0.818e-8■■□□□ 13.5
LARP4Q71RC2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.82■□□□□ 0.282e-6■■□□□ 13.5
LARP4Q71RC2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-6■■□□□ 13.5
LARP4Q71RC2 RHBDD2-204ENST00000454791 1831 ntTSL 224.48■■□□□ 1.518e-7■■□□□ 13.5
LARP4Q71RC2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.2■■□□□ 1.468e-7■■□□□ 13.5
LARP4Q71RC2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.968e-7■■□□□ 13.5
LARP4Q71RC2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.98□□□□□ -0.338e-7■■□□□ 13.5
LARP4Q71RC2 RPL18-211ENST00000550973 1111 ntTSL 518.74■□□□□ 0.593e-12■■□□□ 13.5
LARP4Q71RC2 RPL18-201ENST00000084795 612 ntTSL 1 (best)15.62■□□□□ 0.093e-12■■□□□ 13.5
LARP4Q71RC2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.063e-14■■□□□ 13.5
LARP4Q71RC2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.073e-14■■□□□ 13.5
LARP4Q71RC2 HNRNPH3-211ENST00000491200 2308 ntTSL 1 (best)14.24□□□□□ -0.133e-14■■□□□ 13.5
LARP4Q71RC2 HNRNPH3-206ENST00000478698 1507 ntTSL 213.85□□□□□ -0.193e-14■■□□□ 13.5
LARP4Q71RC2 HNRNPH3-210ENST00000490442 1521 ntTSL 213.85□□□□□ -0.193e-14■■□□□ 13.5
LARP4Q71RC2 HNRNPH3-208ENST00000481819 2704 ntTSL 1 (best)13.4□□□□□ -0.263e-14■■□□□ 13.5
LARP4Q71RC2 HNRNPH3-205ENST00000469172 3356 ntTSL 210.04□□□□□ -0.83e-14■■□□□ 13.5
LARP4Q71RC2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.278e-10■■□□□ 13.5
LARP4Q71RC2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.54■□□□□ 0.088e-10■■□□□ 13.5
LARP4Q71RC2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.352e-6■■□□□ 13.5
LARP4Q71RC2 RPS18-235ENST00000479802 413 ntTSL 210.65□□□□□ -0.71e-21■■□□□ 13.5
LARP4Q71RC2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.042e-14■■□□□ 13.5
LARP4Q71RC2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.35□□□□□ -0.112e-14■■□□□ 13.5
LARP4Q71RC2 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.952e-14■■□□□ 13.5
LARP4Q71RC2 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.365e-36■■□□□ 13.5
LARP4Q71RC2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.012e-7■■□□□ 13.5
Retrieved 100 of 15,922 protein–RNA pairs in 550.9 ms