RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
RPN1-207ENST00000497289 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
RPN1-207ENST00000497289 ZCCHC6Q5VYS8 1495 aaKnown RBP29.78■■■□□ 2.36
RPN1-207ENST00000497289 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
RPN1-207ENST00000497289 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
RPN1-207ENST00000497289 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
RPN1-207ENST00000497289 ABCC9O60706 1549 aa28.86■■■□□ 2.21
RPN1-207ENST00000497289 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
RPN1-207ENST00000497289 NACADO15069 1562 aa28.61■■■□□ 2.17
RPN1-207ENST00000497289 SCRIBQ14160 1630 aa28.35■■■□□ 2.13
RPN1-207ENST00000497289 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.13
RPN1-207ENST00000497289 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
RPN1-207ENST00000497289 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
RPN1-207ENST00000497289 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
RPN1-207ENST00000497289 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
RPN1-207ENST00000497289 CECR2Q9BXF3 1484 aa27.44■■□□□ 1.98
RPN1-207ENST00000497289 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
RPN1-207ENST00000497289 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
RPN1-207ENST00000497289 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.951e-8■■□□□ 12.6
RPN1-207ENST00000497289 SMARCA4P51532 1647 aa27.2■■□□□ 1.94
RPN1-207ENST00000497289 WIZO95785 1651 aa27.18■■□□□ 1.94
RPN1-207ENST00000497289 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
RPN1-207ENST00000497289 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
RPN1-207ENST00000497289 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
RPN1-207ENST00000497289 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
RPN1-207ENST00000497289 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
RPN1-207ENST00000497289 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
RPN1-207ENST00000497289 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
RPN1-207ENST00000497289 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
RPN1-207ENST00000497289 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
RPN1-207ENST00000497289 NCAPD3P42695 1498 aa26.35■■□□□ 1.81
RPN1-207ENST00000497289 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
RPN1-207ENST00000497289 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
RPN1-207ENST00000497289 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
RPN1-207ENST00000497289 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
RPN1-207ENST00000497289 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.74
RPN1-207ENST00000497289 CFTRP13569 1480 aa25.83■■□□□ 1.73
RPN1-207ENST00000497289 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.73
RPN1-207ENST00000497289 SYNJ1O43426 1573 aa25.83■■□□□ 1.72
RPN1-207ENST00000497289 FAM9AQ8IZU1 332 aaPredicted RBP25.8■■□□□ 1.72
RPN1-207ENST00000497289 BIVM-ERCC5R4GMW8 1640 aa25.72■■□□□ 1.71
RPN1-207ENST00000497289 TOP2BQ02880 1626 aa25.71■■□□□ 1.71
RPN1-207ENST00000497289 CADPSQ9ULU8 1353 aa25.68■■□□□ 1.7
RPN1-207ENST00000497289 EEA1Q15075 1411 aa25.66■■□□□ 1.7
RPN1-207ENST00000497289 SOGA1O94964 1423 aa25.62■■□□□ 1.69
RPN1-207ENST00000497289 CUX1P39880 1505 aa25.55■■□□□ 1.68
RPN1-207ENST00000497289 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
RPN1-207ENST00000497289 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
RPN1-207ENST00000497289 FANCD2Q9BXW9 1451 aa25.43■■□□□ 1.66
RPN1-207ENST00000497289 CSRNP3Q8WYN3 585 aa25.43■■□□□ 1.66
RPN1-207ENST00000497289 EHMT2Q96KQ7 1210 aa25.43■■□□□ 1.66
RPN1-207ENST00000497289 NESP48681 1621 aa25.41■■□□□ 1.66
RPN1-207ENST00000497289 DNAJC5BQ9UF47 199 aa25.4■■□□□ 1.66
RPN1-207ENST00000497289 KIF21BO75037 1637 aa25.37■■□□□ 1.65
RPN1-207ENST00000497289 GOLGA3Q08378 1498 aa25.33■■□□□ 1.64
RPN1-207ENST00000497289 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
RPN1-207ENST00000497289 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
RPN1-207ENST00000497289 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
RPN1-207ENST00000497289 TNIKQ9UKE5 1360 aa25.24■■□□□ 1.63
RPN1-207ENST00000497289 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
RPN1-207ENST00000497289 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
RPN1-207ENST00000497289 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
RPN1-207ENST00000497289 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
RPN1-207ENST00000497289 CEP162Q5TB80 1403 aa25.14■■□□□ 1.62
RPN1-207ENST00000497289 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
RPN1-207ENST00000497289 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
RPN1-207ENST00000497289 CUX2O14529 1486 aa25.11■■□□□ 1.61
RPN1-207ENST00000497289 RAPGEF2Q9Y4G8 1499 aa25.11■■□□□ 1.61
RPN1-207ENST00000497289 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
RPN1-207ENST00000497289 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
RPN1-207ENST00000497289 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.6
RPN1-207ENST00000497289 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
RPN1-207ENST00000497289 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
RPN1-207ENST00000497289 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
RPN1-207ENST00000497289 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
RPN1-207ENST00000497289 IGF1RP08069 1367 aa24.92■■□□□ 1.58
RPN1-207ENST00000497289 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
RPN1-207ENST00000497289 CLIP1P30622 1438 aa24.89■■□□□ 1.58
RPN1-207ENST00000497289 TRIM26Q12899 539 aaPredicted RBP24.87■■□□□ 1.57
RPN1-207ENST00000497289 CUL7Q14999 1698 aa24.85■■□□□ 1.57
RPN1-207ENST00000497289 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
RPN1-207ENST00000497289 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
RPN1-207ENST00000497289 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
RPN1-207ENST00000497289 WDR62O43379 1518 aa24.8■■□□□ 1.56
RPN1-207ENST00000497289 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
RPN1-207ENST00000497289 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
RPN1-207ENST00000497289 VPS8Q8N3P4 1428 aa24.72■■□□□ 1.55
RPN1-207ENST00000497289 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.55
RPN1-207ENST00000497289 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
RPN1-207ENST00000497289 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
RPN1-207ENST00000497289 CTTNBP2Q8WZ74 1663 aa24.66■■□□□ 1.54
RPN1-207ENST00000497289 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
RPN1-207ENST00000497289 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
RPN1-207ENST00000497289 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
RPN1-207ENST00000497289 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
RPN1-207ENST00000497289 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.53
RPN1-207ENST00000497289 AQRO60306 1485 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■■□ 25.2
RPN1-207ENST00000497289 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
RPN1-207ENST00000497289 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
RPN1-207ENST00000497289 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms