RNA–Protein interactions for RNA: ENST00000602459.6

AC012254.2-201, humanhuman

APPRIS ALT2 TSL 5

Gene AC012254.2, Length 1,443 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012254.2-201ENST00000602459 NISCHQ9Y2I1 1504 aa34.41■■■■□ 3.1
AC012254.2-201ENST00000602459 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
AC012254.2-201ENST00000602459 ABCC9O60706 1549 aa29.67■■■□□ 2.34
AC012254.2-201ENST00000602459 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
AC012254.2-201ENST00000602459 NACADO15069 1562 aa28.68■■■□□ 2.18
AC012254.2-201ENST00000602459 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
AC012254.2-201ENST00000602459 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
AC012254.2-201ENST00000602459 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
AC012254.2-201ENST00000602459 DCAF1Q9Y4B6 1507 aa28.5■■■□□ 2.15
AC012254.2-201ENST00000602459 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
AC012254.2-201ENST00000602459 PABPN1Q86U42 306 aaKnown RBP eCLIP27.81■■■□□ 2.04
AC012254.2-201ENST00000602459 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
AC012254.2-201ENST00000602459 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
AC012254.2-201ENST00000602459 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
AC012254.2-201ENST00000602459 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
AC012254.2-201ENST00000602459 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
AC012254.2-201ENST00000602459 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
AC012254.2-201ENST00000602459 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
AC012254.2-201ENST00000602459 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.86
AC012254.2-201ENST00000602459 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
AC012254.2-201ENST00000602459 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
AC012254.2-201ENST00000602459 ATAD2BQ9ULI0 1458 aa26.47■■□□□ 1.83
AC012254.2-201ENST00000602459 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
AC012254.2-201ENST00000602459 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
AC012254.2-201ENST00000602459 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
AC012254.2-201ENST00000602459 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
AC012254.2-201ENST00000602459 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
AC012254.2-201ENST00000602459 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
AC012254.2-201ENST00000602459 WIZO95785 1651 aa26.17■■□□□ 1.78
AC012254.2-201ENST00000602459 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
AC012254.2-201ENST00000602459 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
AC012254.2-201ENST00000602459 CADPSQ9ULU8 1353 aa25.74■■□□□ 1.71
AC012254.2-201ENST00000602459 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
AC012254.2-201ENST00000602459 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
AC012254.2-201ENST00000602459 NESP48681 1621 aa25.67■■□□□ 1.7
AC012254.2-201ENST00000602459 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
AC012254.2-201ENST00000602459 PDS5BQ9NTI5 1447 aa25.65■■□□□ 1.7
AC012254.2-201ENST00000602459 CFTRP13569 1480 aa25.58■■□□□ 1.68
AC012254.2-201ENST00000602459 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
AC012254.2-201ENST00000602459 CEP164Q9UPV0 1460 aa25.38■■□□□ 1.65
AC012254.2-201ENST00000602459 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
AC012254.2-201ENST00000602459 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
AC012254.2-201ENST00000602459 CUX2O14529 1486 aa25.28■■□□□ 1.64
AC012254.2-201ENST00000602459 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
AC012254.2-201ENST00000602459 THOC2Q8NI27 1593 aaKnown RBP25.21■■□□□ 1.63
AC012254.2-201ENST00000602459 WDR62O43379 1518 aa25.13■■□□□ 1.61
AC012254.2-201ENST00000602459 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
AC012254.2-201ENST00000602459 URB2Q14146 1524 aaKnown RBP25.06■■□□□ 1.6
AC012254.2-201ENST00000602459 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
AC012254.2-201ENST00000602459 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
AC012254.2-201ENST00000602459 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
AC012254.2-201ENST00000602459 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
AC012254.2-201ENST00000602459 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
AC012254.2-201ENST00000602459 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
AC012254.2-201ENST00000602459 CUX1P39880 1505 aa24.82■■□□□ 1.56
AC012254.2-201ENST00000602459 POLA1P09884 1462 aaPredicted RBP24.79■■□□□ 1.56
AC012254.2-201ENST00000602459 SOGA1O94964 1423 aa24.78■■□□□ 1.56
AC012254.2-201ENST00000602459 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
AC012254.2-201ENST00000602459 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
AC012254.2-201ENST00000602459 RAD54L2Q9Y4B4 1467 aa24.66■■□□□ 1.54
AC012254.2-201ENST00000602459 BIVM-ERCC5R4GMW8 1640 aa24.65■■□□□ 1.54
AC012254.2-201ENST00000602459 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
AC012254.2-201ENST00000602459 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
AC012254.2-201ENST00000602459 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
AC012254.2-201ENST00000602459 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
AC012254.2-201ENST00000602459 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
AC012254.2-201ENST00000602459 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.521e-7■■■■□ 21.1
AC012254.2-201ENST00000602459 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
AC012254.2-201ENST00000602459 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
AC012254.2-201ENST00000602459 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
AC012254.2-201ENST00000602459 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
AC012254.2-201ENST00000602459 GRIN2BQ13224 1484 aa24.45■■□□□ 1.5
AC012254.2-201ENST00000602459 FBLN2P98095 1184 aa24.38■■□□□ 1.49
AC012254.2-201ENST00000602459 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
AC012254.2-201ENST00000602459 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
AC012254.2-201ENST00000602459 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
AC012254.2-201ENST00000602459 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
AC012254.2-201ENST00000602459 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
AC012254.2-201ENST00000602459 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
AC012254.2-201ENST00000602459 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
AC012254.2-201ENST00000602459 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
AC012254.2-201ENST00000602459 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
AC012254.2-201ENST00000602459 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
AC012254.2-201ENST00000602459 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
AC012254.2-201ENST00000602459 IGF1RP08069 1367 aa24.18■■□□□ 1.46
AC012254.2-201ENST00000602459 CHD1O14646 1710 aa24.13■■□□□ 1.45
AC012254.2-201ENST00000602459 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
AC012254.2-201ENST00000602459 GRIN2AQ12879 1464 aa24.09■■□□□ 1.45
AC012254.2-201ENST00000602459 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
AC012254.2-201ENST00000602459 CUL7Q14999 1698 aa24.08■■□□□ 1.44
AC012254.2-201ENST00000602459 EEA1Q15075 1411 aa24.05■■□□□ 1.44
AC012254.2-201ENST00000602459 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
AC012254.2-201ENST00000602459 CSRNP3Q8WYN3 585 aa24.01■■□□□ 1.43
AC012254.2-201ENST00000602459 NUP160Q12769 1436 aa23.96■■□□□ 1.43
AC012254.2-201ENST00000602459 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
AC012254.2-201ENST00000602459 FAM9AQ8IZU1 332 aaPredicted RBP23.93■■□□□ 1.42
AC012254.2-201ENST00000602459 CLASP1Q7Z460 1538 aa23.91■■□□□ 1.42
AC012254.2-201ENST00000602459 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
AC012254.2-201ENST00000602459 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
AC012254.2-201ENST00000602459 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms