RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.28
PFDN5-219ENST00000553171 CHIC1Q5VXU3 224 aa12.32□□□□□ -0.44
PFDN5-219ENST00000553171 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
PFDN5-219ENST00000553171 PHF23Q9BUL5 403 aaPredicted RBP11.15□□□□□ -0.62
PFDN5-219ENST00000553171 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
PFDN5-219ENST00000553171 DNAJC5BQ9UF47 199 aa11.01□□□□□ -0.65
PFDN5-219ENST00000553171 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
PFDN5-219ENST00000553171 FOXD1Q16676 465 aa10.73□□□□□ -0.69
PFDN5-219ENST00000553171 ABCC9O60706 1549 aa10.63□□□□□ -0.71
PFDN5-219ENST00000553171 NISCHQ9Y2I1 1504 aa10.28□□□□□ -0.76
PFDN5-219ENST00000553171 MSH5O43196 834 aa10.19□□□□□ -0.78
PFDN5-219ENST00000553171 TRIM41Q8WV44 630 aa9.87□□□□□ -0.83
PFDN5-219ENST00000553171 PIAS4Q8N2W9 510 aaPredicted RBP9.84□□□□□ -0.83
PFDN5-219ENST00000553171 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
PFDN5-219ENST00000553171 CECR2Q9BXF3 1484 aa9.72□□□□□ -0.85
PFDN5-219ENST00000553171 RB1CC1Q8TDY2 1594 aa9.67□□□□□ -0.86
PFDN5-219ENST00000553171 CUX2O14529 1486 aa9.64□□□□□ -0.87
PFDN5-219ENST00000553171 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
PFDN5-219ENST00000553171 PPP6R1Q9UPN7 881 aa9.6□□□□□ -0.87
PFDN5-219ENST00000553171 CC2D2AQ9P2K1 1620 aa9.55□□□□□ -0.88
PFDN5-219ENST00000553171 ADRA2BP18089 450 aa9.5□□□□□ -0.89
PFDN5-219ENST00000553171 ILDR1Q86SU0 546 aaPredicted RBP9.47□□□□□ -0.89
PFDN5-219ENST00000553171 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.9
PFDN5-219ENST00000553171 NACADO15069 1562 aa9.38□□□□□ -0.91
PFDN5-219ENST00000553171 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
PFDN5-219ENST00000553171 UNC13AQ9UPW8 1703 aa9.38□□□□□ -0.91
PFDN5-219ENST00000553171 EIF4G1Q04637 1599 aaKnown RBP9.28□□□□□ -0.92
PFDN5-219ENST00000553171 PLPPR3Q6T4P5 718 aa9.25□□□□□ -0.93
PFDN5-219ENST00000553171 SHROOM4Q9ULL8 1493 aa9.25□□□□□ -0.93
PFDN5-219ENST00000553171 ERCC6Q03468 1493 aa9.24□□□□□ -0.93
PFDN5-219ENST00000553171 MYT1Q01538 1121 aa9.17□□□□□ -0.94
PFDN5-219ENST00000553171 CACNB1Q02641 598 aaPredicted RBP9.13□□□□□ -0.95
PFDN5-219ENST00000553171 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
PFDN5-219ENST00000553171 TRHP20396 242 aaPredicted RBP9.09□□□□□ -0.95
PFDN5-219ENST00000553171 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
PFDN5-219ENST00000553171 TTBK1Q5TCY1 1321 aaPredicted RBP9.06□□□□□ -0.96
PFDN5-219ENST00000553171 PELP1Q8IZL8 1130 aaKnown RBP9.01□□□□□ -0.97
PFDN5-219ENST00000553171 MYO15BQ96JP2 1530 aa8.96□□□□□ -0.97
PFDN5-219ENST00000553171 RIMBP3CA6NJZ7 1639 aa8.96□□□□□ -0.98
PFDN5-219ENST00000553171 RIMBP3BA6NNM3 1639 aa8.96□□□□□ -0.98
PFDN5-219ENST00000553171 RIMBP3Q9UFD9 1639 aa8.96□□□□□ -0.98
PFDN5-219ENST00000553171 DMRT2Q9Y5R5 561 aa8.94□□□□□ -0.98
PFDN5-219ENST00000553171 THOC2Q8NI27 1593 aaKnown RBP8.94□□□□□ -0.98
PFDN5-219ENST00000553171 MAPK8IP2Q13387 824 aaPredicted RBP8.93□□□□□ -0.98
PFDN5-219ENST00000553171 SOCS7O14512 581 aa8.92□□□□□ -0.98
PFDN5-219ENST00000553171 CYB5RLQ6IPT4 315 aa8.89□□□□□ -0.99
PFDN5-219ENST00000553171 BAZ1AQ9NRL2 1556 aaPredicted RBP8.89□□□□□ -0.99
PFDN5-219ENST00000553171 ARHGEF11O15085 1522 aa8.85□□□□□ -0.99
PFDN5-219ENST00000553171 LMTK3Q96Q04 1460 aa8.85□□□□□ -0.99
PFDN5-219ENST00000553171 NESP48681 1621 aa8.85□□□□□ -0.99
PFDN5-219ENST00000553171 FBXO41Q8TF61 875 aa8.82□□□□□ -1
PFDN5-219ENST00000553171 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
PFDN5-219ENST00000553171 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
PFDN5-219ENST00000553171 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
PFDN5-219ENST00000553171 NCAPD3P42695 1498 aa8.73□□□□□ -1.01
PFDN5-219ENST00000553171 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
PFDN5-219ENST00000553171 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
PFDN5-219ENST00000553171 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
PFDN5-219ENST00000553171 RNF39Q9H2S5 420 aa8.7□□□□□ -1.02
PFDN5-219ENST00000553171 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
PFDN5-219ENST00000553171 PDS5BQ9NTI5 1447 aa8.65□□□□□ -1.02
PFDN5-219ENST00000553171 ERCC6L2Q5T890 1561 aa8.65□□□□□ -1.03
PFDN5-219ENST00000553171 KIF21AQ7Z4S6 1674 aa8.62□□□□□ -1.03
PFDN5-219ENST00000553171 LAMC3Q9Y6N6 1575 aa8.62□□□□□ -1.03
PFDN5-219ENST00000553171 WDR62O43379 1518 aa8.61□□□□□ -1.03
PFDN5-219ENST00000553171 MRC2Q9UBG0 1479 aa8.6□□□□□ -1.03
PFDN5-219ENST00000553171 APLP2Q06481 763 aa8.6□□□□□ -1.03
PFDN5-219ENST00000553171 DCAF8L1A6NGE4 600 aa8.57□□□□□ -1.04
PFDN5-219ENST00000553171 DISP3Q9P2K9 1392 aa8.57□□□□□ -1.04
PFDN5-219ENST00000553171 SCAF1Q9H7N4 1312 aaKnown RBP8.56□□□□□ -1.04
PFDN5-219ENST00000553171 POTEHQ6S545 545 aa8.53□□□□□ -1.04
PFDN5-219ENST00000553171 RSF1Q96T23 1441 aaPredicted RBP8.53□□□□□ -1.04
PFDN5-219ENST00000553171 ATAD2BQ9ULI0 1458 aa8.52□□□□□ -1.05
PFDN5-219ENST00000553171 HECW2Q9P2P5 1572 aa8.51□□□□□ -1.05
PFDN5-219ENST00000553171 HMGXB3Q12766 1538 aa8.5□□□□□ -1.05
PFDN5-219ENST00000553171 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
PFDN5-219ENST00000553171 C1QBPQ07021 282 aaKnown RBP8.48□□□□□ -1.05
PFDN5-219ENST00000553171 DCAF1Q9Y4B6 1507 aa8.45□□□□□ -1.06
PFDN5-219ENST00000553171 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
PFDN5-219ENST00000553171 CADPSQ9ULU8 1353 aa8.4□□□□□ -1.06
PFDN5-219ENST00000553171 NCBP3Q53F19 620 aaKnown RBP8.4□□□□□ -1.06
PFDN5-219ENST00000553171 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
PFDN5-219ENST00000553171 CEP164Q9UPV0 1460 aa8.34□□□□□ -1.07
PFDN5-219ENST00000553171 BAZ1BQ9UIG0 1483 aaKnown RBP8.33□□□□□ -1.08
PFDN5-219ENST00000553171 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
PFDN5-219ENST00000553171 ADGRL1O94910 1474 aa8.31□□□□□ -1.08
PFDN5-219ENST00000553171 SPATA31D1Q6ZQQ2 1576 aa8.31□□□□□ -1.08
PFDN5-219ENST00000553171 SMARCA4P51532 1647 aa8.29□□□□□ -1.08
PFDN5-219ENST00000553171 CHD1O14646 1710 aa8.28□□□□□ -1.08
PFDN5-219ENST00000553171 ZCCHC6Q5VYS8 1495 aaKnown RBP8.27□□□□□ -1.09
PFDN5-219ENST00000553171 KIF13AQ9H1H9 1805 aa8.26□□□□□ -1.09
PFDN5-219ENST00000553171 URB2Q14146 1524 aaKnown RBP8.26□□□□□ -1.09
PFDN5-219ENST00000553171 FBLN2P98095 1184 aa8.26□□□□□ -1.09
PFDN5-219ENST00000553171 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
PFDN5-219ENST00000553171 GAPVD1Q14C86 1478 aa8.25□□□□□ -1.09
PFDN5-219ENST00000553171 IFT140Q96RY7 1462 aa8.25□□□□□ -1.09
PFDN5-219ENST00000553171 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
PFDN5-219ENST00000553171 CERKQ8TCT0 537 aa8.22□□□□□ -1.09
PFDN5-219ENST00000553171 KDM6BO15054 1643 aa8.21□□□□□ -1.09
PFDN5-219ENST00000553171 EHMT2Q96KQ7 1210 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms