RNA–Protein interactions for RNA: ENST00000429494.5

SLC35F6-203, Transcript of solute carrier family 35 member F6, humanhuman

TSL 1 (best)

Gene SLC35F6, Length 3,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35F6-203ENST00000429494 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
SLC35F6-203ENST00000429494 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
SLC35F6-203ENST00000429494 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
SLC35F6-203ENST00000429494 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
SLC35F6-203ENST00000429494 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
SLC35F6-203ENST00000429494 CCDC180Q9P1Z9 1646 aa18.01■□□□□ 0.47
SLC35F6-203ENST00000429494 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
SLC35F6-203ENST00000429494 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
SLC35F6-203ENST00000429494 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
SLC35F6-203ENST00000429494 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
SLC35F6-203ENST00000429494 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
SLC35F6-203ENST00000429494 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
SLC35F6-203ENST00000429494 ABCC9O60706 1549 aa17.58■□□□□ 0.41
SLC35F6-203ENST00000429494 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
SLC35F6-203ENST00000429494 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
SLC35F6-203ENST00000429494 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.36
SLC35F6-203ENST00000429494 HRCP23327 699 aa17.31■□□□□ 0.36
SLC35F6-203ENST00000429494 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
SLC35F6-203ENST00000429494 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
SLC35F6-203ENST00000429494 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
SLC35F6-203ENST00000429494 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
SLC35F6-203ENST00000429494 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
SLC35F6-203ENST00000429494 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
SLC35F6-203ENST00000429494 RB1CC1Q8TDY2 1594 aa16.97■□□□□ 0.31
SLC35F6-203ENST00000429494 NACADO15069 1562 aa16.9■□□□□ 0.3
SLC35F6-203ENST00000429494 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
SLC35F6-203ENST00000429494 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
SLC35F6-203ENST00000429494 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
SLC35F6-203ENST00000429494 WIZO95785 1651 aa16.76■□□□□ 0.27
SLC35F6-203ENST00000429494 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
SLC35F6-203ENST00000429494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
SLC35F6-203ENST00000429494 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
SLC35F6-203ENST00000429494 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
SLC35F6-203ENST00000429494 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
SLC35F6-203ENST00000429494 APLP2Q06481 763 aa16.54■□□□□ 0.24
SLC35F6-203ENST00000429494 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
SLC35F6-203ENST00000429494 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
SLC35F6-203ENST00000429494 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
SLC35F6-203ENST00000429494 SOGA1O94964 1423 aa16.45■□□□□ 0.22
SLC35F6-203ENST00000429494 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
SLC35F6-203ENST00000429494 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
SLC35F6-203ENST00000429494 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
SLC35F6-203ENST00000429494 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
SLC35F6-203ENST00000429494 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
SLC35F6-203ENST00000429494 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
SLC35F6-203ENST00000429494 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
SLC35F6-203ENST00000429494 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
SLC35F6-203ENST00000429494 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
SLC35F6-203ENST00000429494 ITGAEP38570 1179 aa16.23■□□□□ 0.19
SLC35F6-203ENST00000429494 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
SLC35F6-203ENST00000429494 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
SLC35F6-203ENST00000429494 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
SLC35F6-203ENST00000429494 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
SLC35F6-203ENST00000429494 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
SLC35F6-203ENST00000429494 CLIP1P30622 1438 aa16.14■□□□□ 0.17
SLC35F6-203ENST00000429494 EEA1Q15075 1411 aa16.13■□□□□ 0.17
SLC35F6-203ENST00000429494 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
SLC35F6-203ENST00000429494 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
SLC35F6-203ENST00000429494 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
SLC35F6-203ENST00000429494 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
SLC35F6-203ENST00000429494 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
SLC35F6-203ENST00000429494 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
SLC35F6-203ENST00000429494 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
SLC35F6-203ENST00000429494 MYT1Q01538 1121 aa16.01■□□□□ 0.15
SLC35F6-203ENST00000429494 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
SLC35F6-203ENST00000429494 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
SLC35F6-203ENST00000429494 ZNF316A6NFI3 1004 aaPredicted RBP15.98■□□□□ 0.15
SLC35F6-203ENST00000429494 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
SLC35F6-203ENST00000429494 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
SLC35F6-203ENST00000429494 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
SLC35F6-203ENST00000429494 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
SLC35F6-203ENST00000429494 VPS8Q8N3P4 1428 aa15.88■□□□□ 0.13
SLC35F6-203ENST00000429494 ACIN1Q9UKV3 1341 aaKnown RBP15.88■□□□□ 0.13
SLC35F6-203ENST00000429494 GTF3C3Q9Y5Q9 886 aa15.88■□□□□ 0.13
SLC35F6-203ENST00000429494 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
SLC35F6-203ENST00000429494 MIER1Q8N108 512 aa15.8■□□□□ 0.12
SLC35F6-203ENST00000429494 CUX2O14529 1486 aa15.78■□□□□ 0.12
SLC35F6-203ENST00000429494 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
SLC35F6-203ENST00000429494 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
SLC35F6-203ENST00000429494 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
SLC35F6-203ENST00000429494 KIF21BO75037 1637 aa15.72■□□□□ 0.11
SLC35F6-203ENST00000429494 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
SLC35F6-203ENST00000429494 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
SLC35F6-203ENST00000429494 CUX1P39880 1505 aa15.68■□□□□ 0.1
SLC35F6-203ENST00000429494 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
SLC35F6-203ENST00000429494 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
SLC35F6-203ENST00000429494 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
SLC35F6-203ENST00000429494 PRXQ9BXM0 1461 aa15.6■□□□□ 0.09
SLC35F6-203ENST00000429494 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
SLC35F6-203ENST00000429494 CFTRP13569 1480 aa15.6■□□□□ 0.09
SLC35F6-203ENST00000429494 HIRIP3Q9BW71 556 aaPredicted RBP15.6■□□□□ 0.09
SLC35F6-203ENST00000429494 IGF1RP08069 1367 aa15.59■□□□□ 0.09
SLC35F6-203ENST00000429494 SIN3AQ96ST3 1273 aa15.56■□□□□ 0.08
SLC35F6-203ENST00000429494 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
SLC35F6-203ENST00000429494 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
SLC35F6-203ENST00000429494 DHX57Q6P158 1386 aaKnown RBP15.54■□□□□ 0.08
SLC35F6-203ENST00000429494 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
SLC35F6-203ENST00000429494 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
SLC35F6-203ENST00000429494 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.07
SLC35F6-203ENST00000429494 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms