Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
ACTN4O43707 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.54■■□□□ 1.04
ACTN4O43707 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.54■■□□□ 1.04
ACTN4O43707 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.54■■□□□ 1.04
ACTN4O43707 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.54■■□□□ 1.04
ACTN4O43707 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
ACTN4O43707 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.54■■□□□ 1.04
ACTN4O43707 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.54■■□□□ 1.04
ACTN4O43707 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 FEM1AP3-201ENST00000403722 1741 ntBASIC21.54■■□□□ 1.04
ACTN4O43707 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ACTN4O43707 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
ACTN4O43707 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
ACTN4O43707 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.54■■□□□ 1.04
ACTN4O43707 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ACTN4O43707 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
ACTN4O43707 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.53■■□□□ 1.04
ACTN4O43707 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.53■■□□□ 1.04
ACTN4O43707 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.53■■□□□ 1.04
ACTN4O43707 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.53■■□□□ 1.04
ACTN4O43707 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACTN4O43707 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACTN4O43707 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACTN4O43707 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.52■■□□□ 1.04
ACTN4O43707 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.52■■□□□ 1.04
ACTN4O43707 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACTN4O43707 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.52■■□□□ 1.04
ACTN4O43707 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ACTN4O43707 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.52■■□□□ 1.04
ACTN4O43707 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACTN4O43707 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACTN4O43707 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ACTN4O43707 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ACTN4O43707 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ACTN4O43707 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.51■■□□□ 1.03
ACTN4O43707 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.51■■□□□ 1.03
ACTN4O43707 AL031598.1-201ENST00000561511 1773 ntBASIC21.51■■□□□ 1.03
ACTN4O43707 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.51■■□□□ 1.03
ACTN4O43707 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.51■■□□□ 1.03
ACTN4O43707 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.51■■□□□ 1.03
ACTN4O43707 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.51■■□□□ 1.03
ACTN4O43707 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.51■■□□□ 1.03
ACTN4O43707 KRT17P3-201ENST00000420566 1262 ntBASIC21.51■■□□□ 1.03
ACTN4O43707 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 KRT18P6-201ENST00000555540 1265 ntBASIC21.51■■□□□ 1.03
ACTN4O43707 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.51■■□□□ 1.03
ACTN4O43707 AC093525.10-201ENST00000625130 1569 ntBASIC21.51■■□□□ 1.03
ACTN4O43707 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.51■■□□□ 1.03
ACTN4O43707 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ACTN4O43707 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.51■■□□□ 1.03
ACTN4O43707 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.5■■□□□ 1.03
ACTN4O43707 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACTN4O43707 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACTN4O43707 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACTN4O43707 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACTN4O43707 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ACTN4O43707 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.5■■□□□ 1.03
ACTN4O43707 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ACTN4O43707 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms