RNA–Protein interactions for RNA: ENST00000261206.7

ACSS3-201, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACSS3, Length 2,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-201ENST00000261206 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
ACSS3-201ENST00000261206 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
ACSS3-201ENST00000261206 SUPT5HO00267 1087 aaKnown RBP32.01■■■□□ 2.71
ACSS3-201ENST00000261206 HRCP23327 699 aa31.95■■■□□ 2.71
ACSS3-201ENST00000261206 MYO15BQ96JP2 1530 aa31.6■■■□□ 2.65
ACSS3-201ENST00000261206 PCGF6Q9BYE7 350 aa31.45■■■□□ 2.62
ACSS3-201ENST00000261206 CHIC1Q5VXU3 224 aa31.43■■■□□ 2.62
ACSS3-201ENST00000261206 PPARGC1BQ86YN6 1023 aaKnown RBP31.3■■■□□ 2.6
ACSS3-201ENST00000261206 ZCCHC6Q5VYS8 1495 aaKnown RBP31.25■■■□□ 2.59
ACSS3-201ENST00000261206 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
ACSS3-201ENST00000261206 DCAF1Q9Y4B6 1507 aa30.86■■■□□ 2.53
ACSS3-201ENST00000261206 CCDC180Q9P1Z9 1646 aa30.71■■■□□ 2.51
ACSS3-201ENST00000261206 LOC105371045A0A1W2PR82 267 aa30.66■■■□□ 2.5
ACSS3-201ENST00000261206 TRIM26Q12899 539 aaPredicted RBP30.52■■■□□ 2.48
ACSS3-201ENST00000261206 PELP1Q8IZL8 1130 aaKnown RBP30.34■■■□□ 2.45
ACSS3-201ENST00000261206 ZEB1P37275 1124 aaPredicted RBP30.16■■■□□ 2.42
ACSS3-201ENST00000261206 SCAF1Q9H7N4 1312 aaKnown RBP30.06■■■□□ 2.4
ACSS3-201ENST00000261206 ABCC9O60706 1549 aa29.66■■■□□ 2.34
ACSS3-201ENST00000261206 TRIM41Q8WV44 630 aa29.66■■■□□ 2.34
ACSS3-201ENST00000261206 FAM9AQ8IZU1 332 aaPredicted RBP29.59■■■□□ 2.33
ACSS3-201ENST00000261206 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
ACSS3-201ENST00000261206 EHMT2Q96KQ7 1210 aa29.43■■■□□ 2.3
ACSS3-201ENST00000261206 ACIN1Q9UKV3 1341 aaKnown RBP29.41■■■□□ 2.3
ACSS3-201ENST00000261206 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
ACSS3-201ENST00000261206 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
ACSS3-201ENST00000261206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.25■■■□□ 2.27
ACSS3-201ENST00000261206 CCER1Q8TC90 406 aaPredicted RBP29.18■■■□□ 2.26
ACSS3-201ENST00000261206 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
ACSS3-201ENST00000261206 GTF3C3Q9Y5Q9 886 aa29.16■■■□□ 2.26
ACSS3-201ENST00000261206 DIEXFQ68CQ4 756 aaKnown RBP29.08■■■□□ 2.25
ACSS3-201ENST00000261206 CENPBP07199 599 aaPredicted RBP29.07■■■□□ 2.24
ACSS3-201ENST00000261206 MYT1Q01538 1121 aa29.05■■■□□ 2.24
ACSS3-201ENST00000261206 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
ACSS3-201ENST00000261206 TTBK1Q5TCY1 1321 aaPredicted RBP28.7■■■□□ 2.19
ACSS3-201ENST00000261206 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
ACSS3-201ENST00000261206 WIZO95785 1651 aa28.61■■■□□ 2.17
ACSS3-201ENST00000261206 WRNQ14191 1432 aaPredicted RBP eCLIP28.59■■■□□ 2.17
ACSS3-201ENST00000261206 ZNF316A6NFI3 1004 aaPredicted RBP28.58■■■□□ 2.17
ACSS3-201ENST00000261206 YTHDC1Q96MU7 727 aaKnown RBP28.57■■■□□ 2.16
ACSS3-201ENST00000261206 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
ACSS3-201ENST00000261206 CEP162Q5TB80 1403 aa28.48■■■□□ 2.15
ACSS3-201ENST00000261206 BAZ1AQ9NRL2 1556 aaPredicted RBP28.4■■■□□ 2.14
ACSS3-201ENST00000261206 MIER1Q8N108 512 aa28.37■■■□□ 2.13
ACSS3-201ENST00000261206 CCDC88BA6NC98 1476 aa28.35■■■□□ 2.13
ACSS3-201ENST00000261206 ABCC8Q09428 1581 aa28.34■■■□□ 2.13
ACSS3-201ENST00000261206 TNIKQ9UKE5 1360 aa28.29■■■□□ 2.12
ACSS3-201ENST00000261206 SOGA1O94964 1423 aa28.24■■■□□ 2.11
ACSS3-201ENST00000261206 NACADO15069 1562 aa28.23■■■□□ 2.11
ACSS3-201ENST00000261206 UBTFP17480 764 aaKnown RBP28.15■■■□□ 2.1
ACSS3-201ENST00000261206 HNRNPUL2Q1KMD3 747 aaKnown RBP28.1■■■□□ 2.09
ACSS3-201ENST00000261206 CSRNP3Q8WYN3 585 aa28.09■■■□□ 2.09
ACSS3-201ENST00000261206 RUSC2Q8N2Y8 1516 aa28.07■■■□□ 2.08
ACSS3-201ENST00000261206 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
ACSS3-201ENST00000261206 EEA1Q15075 1411 aa28.04■■■□□ 2.08
ACSS3-201ENST00000261206 GOLGA3Q08378 1498 aa27.98■■■□□ 2.07
ACSS3-201ENST00000261206 SMARCA2P51531 1590 aa27.97■■■□□ 2.07
ACSS3-201ENST00000261206 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
ACSS3-201ENST00000261206 SMARCA4P51532 1647 aa27.82■■■□□ 2.04
ACSS3-201ENST00000261206 CLSPNQ9HAW4 1339 aa27.79■■■□□ 2.04
ACSS3-201ENST00000261206 CLIP1P30622 1438 aa27.75■■■□□ 2.03
ACSS3-201ENST00000261206 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
ACSS3-201ENST00000261206 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
ACSS3-201ENST00000261206 VPS8Q8N3P4 1428 aa27.71■■■□□ 2.03
ACSS3-201ENST00000261206 APLP2Q06481 763 aa27.67■■■□□ 2.02
ACSS3-201ENST00000261206 KIF21BO75037 1637 aa27.66■■■□□ 2.02
ACSS3-201ENST00000261206 TSHZ2Q9NRE2 1034 aa27.63■■■□□ 2.01
ACSS3-201ENST00000261206 DHX57Q6P158 1386 aaKnown RBP27.57■■■□□ 2
ACSS3-201ENST00000261206 ANP32EQ9BTT0 268 aa27.54■■■□□ 2
ACSS3-201ENST00000261206 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
ACSS3-201ENST00000261206 SYNJ1O43426 1573 aa27.52■■■□□ 2
ACSS3-201ENST00000261206 BAZ1BQ9UIG0 1483 aaKnown RBP27.49■■□□□ 1.99
ACSS3-201ENST00000261206 RAPGEF2Q9Y4G8 1499 aa27.49■■□□□ 1.99
ACSS3-201ENST00000261206 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
ACSS3-201ENST00000261206 KCNH8Q96L42 1107 aa27.32■■□□□ 1.96
ACSS3-201ENST00000261206 BCANQ96GW7 911 aa27.27■■□□□ 1.96
ACSS3-201ENST00000261206 BCL11AQ9H165 835 aa27.26■■□□□ 1.96
ACSS3-201ENST00000261206 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
ACSS3-201ENST00000261206 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
ACSS3-201ENST00000261206 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
ACSS3-201ENST00000261206 RRBP1Q9P2E9 1410 aaKnown RBP27.18■■□□□ 1.94
ACSS3-201ENST00000261206 FKBP8Q14318 412 aa27.16■■□□□ 1.94
ACSS3-201ENST00000261206 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
ACSS3-201ENST00000261206 CUX2O14529 1486 aa27.13■■□□□ 1.93
ACSS3-201ENST00000261206 ITGAEP38570 1179 aa27.06■■□□□ 1.92
ACSS3-201ENST00000261206 CCNB3Q8WWL7 1395 aa27.06■■□□□ 1.92
ACSS3-201ENST00000261206 ERICH3Q5RHP9 1530 aa27.05■■□□□ 1.92
ACSS3-201ENST00000261206 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
ACSS3-201ENST00000261206 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
ACSS3-201ENST00000261206 RBM19Q9Y4C8 960 aaKnown RBP27.02■■□□□ 1.92
ACSS3-201ENST00000261206 DDX10Q13206 875 aaKnown RBP27■■□□□ 1.91
ACSS3-201ENST00000261206 MAPKBP1O60336 1514 aa26.99■■□□□ 1.91
ACSS3-201ENST00000261206 RAB3GAP2Q9H2M9 1393 aa26.97■■□□□ 1.91
ACSS3-201ENST00000261206 NEFLP07196 543 aa26.94■■□□□ 1.9
ACSS3-201ENST00000261206 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
ACSS3-201ENST00000261206 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
ACSS3-201ENST00000261206 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.89
ACSS3-201ENST00000261206 TRIM52Q96A61 297 aa26.86■■□□□ 1.89
ACSS3-201ENST00000261206 PPP1R15AO75807 674 aaPredicted RBP26.84■■□□□ 1.89
ACSS3-201ENST00000261206 SIN3AQ96ST3 1273 aa26.82■■□□□ 1.88
ACSS3-201ENST00000261206 ARHGAP35Q9NRY4 1499 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms