Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHCHD1Q96BP2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHCHD1Q96BP2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 KRT16P2-201ENST00000414673 1423 ntBASIC14.02□□□□□ -0.16
CHCHD1Q96BP2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CHCHD1Q96BP2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHCHD1Q96BP2 IRX1P1-201ENST00000438849 1838 ntBASIC14.01□□□□□ -0.17
CHCHD1Q96BP2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.01□□□□□ -0.17
CHCHD1Q96BP2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHCHD1Q96BP2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHCHD1Q96BP2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHCHD1Q96BP2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms