RNA–Protein interactions for RNA: ENST00000320172.10

FAM46A-201, Transcript of Putative nucleotidyltransferase FAM46A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FAM46A, Length 5,609 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46A-201ENST00000320172 DCAF8L2P0C7V8 631 aa28.31■■■□□ 2.12
FAM46A-201ENST00000320172 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
FAM46A-201ENST00000320172 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
FAM46A-201ENST00000320172 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
FAM46A-201ENST00000320172 EHMT2Q96KQ7 1210 aa26.4■■□□□ 1.82
FAM46A-201ENST00000320172 NISCHQ9Y2I1 1504 aa26.37■■□□□ 1.81
FAM46A-201ENST00000320172 APLP2Q06481 763 aa26.18■■□□□ 1.78
FAM46A-201ENST00000320172 ERICH6Q7L0X2 663 aa25.79■■□□□ 1.72
FAM46A-201ENST00000320172 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
FAM46A-201ENST00000320172 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
FAM46A-201ENST00000320172 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
FAM46A-201ENST00000320172 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
FAM46A-201ENST00000320172 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
FAM46A-201ENST00000320172 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
FAM46A-201ENST00000320172 MYT1Q01538 1121 aa25.35■■□□□ 1.65
FAM46A-201ENST00000320172 NEFLP07196 543 aa25.21■■□□□ 1.63
FAM46A-201ENST00000320172 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
FAM46A-201ENST00000320172 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
FAM46A-201ENST00000320172 ATP1B4Q9UN42 357 aaPredicted RBP25.03■■□□□ 1.6
FAM46A-201ENST00000320172 YTHDC1Q96MU7 727 aaKnown RBP25.03■■□□□ 1.6
FAM46A-201ENST00000320172 UBTFP17480 764 aaKnown RBP24.93■■□□□ 1.58
FAM46A-201ENST00000320172 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.53
FAM46A-201ENST00000320172 DAXXQ9UER7 740 aaPredicted RBP24.57■■□□□ 1.52
FAM46A-201ENST00000320172 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
FAM46A-201ENST00000320172 HRCP23327 699 aa24.48■■□□□ 1.51
FAM46A-201ENST00000320172 POLR3GLQ9BT43 218 aa24.26■■□□□ 1.47
FAM46A-201ENST00000320172 ITGAEP38570 1179 aa24.22■■□□□ 1.47
FAM46A-201ENST00000320172 HNRNPUL2Q1KMD3 747 aaKnown RBP24.08■■□□□ 1.45
FAM46A-201ENST00000320172 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
FAM46A-201ENST00000320172 MYT1LQ9UL68 1186 aa24.06■■□□□ 1.44
FAM46A-201ENST00000320172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.05■■□□□ 1.44
FAM46A-201ENST00000320172 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
FAM46A-201ENST00000320172 ZNF316A6NFI3 1004 aaPredicted RBP24■■□□□ 1.43
FAM46A-201ENST00000320172 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
FAM46A-201ENST00000320172 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
FAM46A-201ENST00000320172 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
FAM46A-201ENST00000320172 CLSPNQ9HAW4 1339 aa23.87■■□□□ 1.41
FAM46A-201ENST00000320172 SLC4A1APQ9BWU0 796 aaKnown RBP23.77■■□□□ 1.4
FAM46A-201ENST00000320172 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
FAM46A-201ENST00000320172 GTF3C3Q9Y5Q9 886 aa23.57■■□□□ 1.36
FAM46A-201ENST00000320172 BCANQ96GW7 911 aa23.56■■□□□ 1.36
FAM46A-201ENST00000320172 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
FAM46A-201ENST00000320172 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
FAM46A-201ENST00000320172 ABCC9O60706 1549 aa23.5■■□□□ 1.35
FAM46A-201ENST00000320172 ANP32CO43423 234 aa23.5■■□□□ 1.35
FAM46A-201ENST00000320172 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
FAM46A-201ENST00000320172 ZBTB47Q9UFB7 747 aaPredicted RBP23.38■■□□□ 1.33
FAM46A-201ENST00000320172 ZNF326Q5BKZ1 582 aaKnown RBP23.26■■□□□ 1.31
FAM46A-201ENST00000320172 CANXP27824 592 aaKnown RBP23.23■■□□□ 1.31
FAM46A-201ENST00000320172 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
FAM46A-201ENST00000320172 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
FAM46A-201ENST00000320172 ANP32AP39687 249 aaKnown RBP23.19■■□□□ 1.3
FAM46A-201ENST00000320172 NEFMP07197 916 aa23.05■■□□□ 1.28
FAM46A-201ENST00000320172 BCL11AQ9H165 835 aa23■■□□□ 1.27
FAM46A-201ENST00000320172 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
FAM46A-201ENST00000320172 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
FAM46A-201ENST00000320172 ANP32BQ92688 251 aaKnown RBP22.91■■□□□ 1.26
FAM46A-201ENST00000320172 FKBP8Q14318 412 aa22.86■■□□□ 1.25
FAM46A-201ENST00000320172 EIF5BO60841 1220 aaKnown RBP22.84■■□□□ 1.25
FAM46A-201ENST00000320172 HSP90AA1P07900 732 aaKnown RBP22.76■■□□□ 1.23
FAM46A-201ENST00000320172 FBLN2P98095 1184 aa22.76■■□□□ 1.23
FAM46A-201ENST00000320172 UPF2Q9HAU5 1272 aaKnown RBP22.76■■□□□ 1.23
FAM46A-201ENST00000320172 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
FAM46A-201ENST00000320172 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
FAM46A-201ENST00000320172 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
FAM46A-201ENST00000320172 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
FAM46A-201ENST00000320172 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
FAM46A-201ENST00000320172 ZNF777Q9ULD5 760 aaPredicted RBP22.66■■□□□ 1.22
FAM46A-201ENST00000320172 ARID3CA6NKF2 412 aa22.65■■□□□ 1.22
FAM46A-201ENST00000320172 FAM9BQ8IZU0 186 aa22.61■■□□□ 1.21
FAM46A-201ENST00000320172 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
FAM46A-201ENST00000320172 CCDC136Q96JN2 1154 aa22.56■■□□□ 1.2
FAM46A-201ENST00000320172 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.54■■□□□ 1.2
FAM46A-201ENST00000320172 NBR1Q14596 966 aa22.53■■□□□ 1.2
FAM46A-201ENST00000320172 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.2
FAM46A-201ENST00000320172 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
FAM46A-201ENST00000320172 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
FAM46A-201ENST00000320172 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
FAM46A-201ENST00000320172 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.18
FAM46A-201ENST00000320172 ESF1Q9H501 851 aaKnown RBP22.38■■□□□ 1.17
FAM46A-201ENST00000320172 STAG3Q9UJ98 1225 aa22.37■■□□□ 1.17
FAM46A-201ENST00000320172 ARXQ96QS3 562 aa22.36■■□□□ 1.17
FAM46A-201ENST00000320172 MRS2Q9HD23 443 aa22.36■■□□□ 1.17
FAM46A-201ENST00000320172 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
FAM46A-201ENST00000320172 DDRGK1Q96HY6 314 aa22.28■■□□□ 1.16
FAM46A-201ENST00000320172 MIER1Q8N108 512 aa22.26■■□□□ 1.15
FAM46A-201ENST00000320172 MYH16Q9H6N6 1097 aa22.25■■□□□ 1.15
FAM46A-201ENST00000320172 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
FAM46A-201ENST00000320172 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
FAM46A-201ENST00000320172 BECN1Q14457 450 aa22.23■■□□□ 1.15
FAM46A-201ENST00000320172 ANP32EQ9BTT0 268 aa22.19■■□□□ 1.14
FAM46A-201ENST00000320172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
FAM46A-201ENST00000320172 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
FAM46A-201ENST00000320172 TRIM44Q96DX7 344 aaPredicted RBP22.15■■□□□ 1.14
FAM46A-201ENST00000320172 NCLP19338 710 aaKnown RBP22.14■■□□□ 1.13
FAM46A-201ENST00000320172 EIF4G2P78344 907 aaKnown RBP eCLIP22.13■■□□□ 1.13
FAM46A-201ENST00000320172 GOLGA6L22H0YM25 854 aa22.1■■□□□ 1.13
FAM46A-201ENST00000320172 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
FAM46A-201ENST00000320172 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
FAM46A-201ENST00000320172 CDK11BP21127 795 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms