RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 DCAF8L2P0C7V8 631 aa29.5■■■□□ 2.31
KDM4B-201ENST00000159111 NISCHQ9Y2I1 1504 aa29.26■■■□□ 2.28
KDM4B-201ENST00000159111 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
KDM4B-201ENST00000159111 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
KDM4B-201ENST00000159111 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
KDM4B-201ENST00000159111 APLP2Q06481 763 aa26.81■■□□□ 1.88
KDM4B-201ENST00000159111 PELP1Q8IZL8 1130 aaKnown RBP26.59■■□□□ 1.85
KDM4B-201ENST00000159111 FAM9AQ8IZU1 332 aaPredicted RBP26.47■■□□□ 1.83
KDM4B-201ENST00000159111 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
KDM4B-201ENST00000159111 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
KDM4B-201ENST00000159111 ZEB1P37275 1124 aaPredicted RBP26.15■■□□□ 1.78
KDM4B-201ENST00000159111 TTBK1Q5TCY1 1321 aaPredicted RBP26.07■■□□□ 1.76
KDM4B-201ENST00000159111 RANGAP1P46060 587 aaPredicted RBP25.86■■□□□ 1.73
KDM4B-201ENST00000159111 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
KDM4B-201ENST00000159111 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
KDM4B-201ENST00000159111 CENPBP07199 599 aaPredicted RBP25.8■■□□□ 1.72
KDM4B-201ENST00000159111 ATP1B4Q9UN42 357 aaPredicted RBP25.71■■□□□ 1.71
KDM4B-201ENST00000159111 TRIM26Q12899 539 aaPredicted RBP25.44■■□□□ 1.66
KDM4B-201ENST00000159111 ERICH6Q7L0X2 663 aa25.31■■□□□ 1.64
KDM4B-201ENST00000159111 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
KDM4B-201ENST00000159111 NEFLP07196 543 aa25.2■■□□□ 1.63
KDM4B-201ENST00000159111 PPARGC1BQ86YN6 1023 aaKnown RBP25.19■■□□□ 1.62
KDM4B-201ENST00000159111 HRCP23327 699 aa25.07■■□□□ 1.6
KDM4B-201ENST00000159111 YTHDC1Q96MU7 727 aaKnown RBP25.05■■□□□ 1.6
KDM4B-201ENST00000159111 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
KDM4B-201ENST00000159111 MYT1Q01538 1121 aa24.94■■□□□ 1.58
KDM4B-201ENST00000159111 ITGAEP38570 1179 aa24.86■■□□□ 1.57
KDM4B-201ENST00000159111 ABCC9O60706 1549 aa24.86■■□□□ 1.57
KDM4B-201ENST00000159111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.85■■□□□ 1.57
KDM4B-201ENST00000159111 HNRNPUL2Q1KMD3 747 aaKnown RBP24.85■■□□□ 1.57
KDM4B-201ENST00000159111 MYT1LQ9UL68 1186 aa24.67■■□□□ 1.54
KDM4B-201ENST00000159111 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
KDM4B-201ENST00000159111 POLR3GLQ9BT43 218 aa24.55■■□□□ 1.52
KDM4B-201ENST00000159111 FAM50AQ14320 339 aaKnown RBP24.41■■□□□ 1.5
KDM4B-201ENST00000159111 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
KDM4B-201ENST00000159111 DAXXQ9UER7 740 aaPredicted RBP24.35■■□□□ 1.49
KDM4B-201ENST00000159111 ZCCHC6Q5VYS8 1495 aaKnown RBP24.3■■□□□ 1.48
KDM4B-201ENST00000159111 TRIM52Q96A61 297 aa24.24■■□□□ 1.47
KDM4B-201ENST00000159111 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
KDM4B-201ENST00000159111 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
KDM4B-201ENST00000159111 CNGB1Q14028 1251 aaPredicted RBP24.14■■□□□ 1.46
KDM4B-201ENST00000159111 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
KDM4B-201ENST00000159111 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
KDM4B-201ENST00000159111 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.45
KDM4B-201ENST00000159111 ANP32CO43423 234 aa23.98■■□□□ 1.43
KDM4B-201ENST00000159111 ZNF316A6NFI3 1004 aaPredicted RBP23.94■■□□□ 1.42
KDM4B-201ENST00000159111 FBLN2P98095 1184 aa23.9■■□□□ 1.42
KDM4B-201ENST00000159111 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
KDM4B-201ENST00000159111 CLSPNQ9HAW4 1339 aa23.84■■□□□ 1.41
KDM4B-201ENST00000159111 ZNF326Q5BKZ1 582 aaKnown RBP23.82■■□□□ 1.4
KDM4B-201ENST00000159111 P3H3Q8IVL6 736 aa23.8■■□□□ 1.4
KDM4B-201ENST00000159111 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
KDM4B-201ENST00000159111 CDK11AQ9UQ88 783 aaPredicted RBP23.76■■□□□ 1.39
KDM4B-201ENST00000159111 GTF3C3Q9Y5Q9 886 aa23.72■■□□□ 1.39
KDM4B-201ENST00000159111 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.38
KDM4B-201ENST00000159111 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
KDM4B-201ENST00000159111 BCANQ96GW7 911 aa23.59■■□□□ 1.37
KDM4B-201ENST00000159111 ZNF777Q9ULD5 760 aaPredicted RBP23.58■■□□□ 1.36
KDM4B-201ENST00000159111 ACIN1Q9UKV3 1341 aaKnown RBP23.53■■□□□ 1.36
KDM4B-201ENST00000159111 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
KDM4B-201ENST00000159111 ZBTB47Q9UFB7 747 aaPredicted RBP23.51■■□□□ 1.35
KDM4B-201ENST00000159111 NACADO15069 1562 aa23.46■■□□□ 1.35
KDM4B-201ENST00000159111 NEFMP07197 916 aa23.46■■□□□ 1.35
KDM4B-201ENST00000159111 CANXP27824 592 aaKnown RBP23.46■■□□□ 1.35
KDM4B-201ENST00000159111 EEA1Q15075 1411 aa23.43■■□□□ 1.34
KDM4B-201ENST00000159111 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
KDM4B-201ENST00000159111 CLIP1P30622 1438 aa23.36■■□□□ 1.33
KDM4B-201ENST00000159111 GOLGA3Q08378 1498 aa23.32■■□□□ 1.32
KDM4B-201ENST00000159111 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.32
KDM4B-201ENST00000159111 NPM1P06748 294 aaKnown RBP eCLIP23.23■■□□□ 1.31
KDM4B-201ENST00000159111 ANP32AP39687 249 aaKnown RBP23.22■■□□□ 1.31
KDM4B-201ENST00000159111 ESF1Q9H501 851 aaKnown RBP23.22■■□□□ 1.31
KDM4B-201ENST00000159111 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
KDM4B-201ENST00000159111 CEP162Q5TB80 1403 aa23.18■■□□□ 1.3
KDM4B-201ENST00000159111 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.33e-6■■■■■ 52.2
KDM4B-201ENST00000159111 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
KDM4B-201ENST00000159111 DDX10Q13206 875 aaKnown RBP23.17■■□□□ 1.3
KDM4B-201ENST00000159111 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
KDM4B-201ENST00000159111 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
KDM4B-201ENST00000159111 TSPY4P0CV99 314 aa23.14■■□□□ 1.3
KDM4B-201ENST00000159111 TSPY10P0CW01 314 aa23.14■■□□□ 1.3
KDM4B-201ENST00000159111 HNRNPUQ00839 825 aaKnown RBP eCLIP23.13■■□□□ 1.29
KDM4B-201ENST00000159111 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
KDM4B-201ENST00000159111 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
KDM4B-201ENST00000159111 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
KDM4B-201ENST00000159111 FKBP8Q14318 412 aa23.12■■□□□ 1.29
KDM4B-201ENST00000159111 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
KDM4B-201ENST00000159111 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
KDM4B-201ENST00000159111 TNIKQ9UKE5 1360 aa23.08■■□□□ 1.29
KDM4B-201ENST00000159111 KIF27Q86VH2 1401 aa23.07■■□□□ 1.28
KDM4B-201ENST00000159111 FAM9BQ8IZU0 186 aa23.06■■□□□ 1.28
KDM4B-201ENST00000159111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.04■■□□□ 1.282e-6■■□□□ 11.4
KDM4B-201ENST00000159111 TMC1Q8TDI8 760 aa23.01■■□□□ 1.27
KDM4B-201ENST00000159111 BCL11AQ9H165 835 aa22.96■■□□□ 1.27
KDM4B-201ENST00000159111 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.96■■□□□ 1.27
KDM4B-201ENST00000159111 NPM2Q86SE8 214 aaKnown RBP22.95■■□□□ 1.26
KDM4B-201ENST00000159111 EIF4G2P78344 907 aaKnown RBP eCLIP22.94■■□□□ 1.265e-7■■■■■ 38.1
KDM4B-201ENST00000159111 WDR43Q15061 677 aaKnown RBP eCLIP22.93■■□□□ 1.263e-6■■■□□ 14.8
KDM4B-201ENST00000159111 MRS2Q9HD23 443 aa22.92■■□□□ 1.26
KDM4B-201ENST00000159111 UPF2Q9HAU5 1272 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms