RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
TRIM8-201ENST00000302424 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
TRIM8-201ENST00000302424 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
TRIM8-201ENST00000302424 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
TRIM8-201ENST00000302424 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
TRIM8-201ENST00000302424 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
TRIM8-201ENST00000302424 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
TRIM8-201ENST00000302424 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
TRIM8-201ENST00000302424 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
TRIM8-201ENST00000302424 LOC105371045A0A1W2PR82 267 aa29.84■■■□□ 2.37
TRIM8-201ENST00000302424 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
TRIM8-201ENST00000302424 PCGF6Q9BYE7 350 aa29.8■■■□□ 2.36
TRIM8-201ENST00000302424 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
TRIM8-201ENST00000302424 HRCP23327 699 aa29.51■■■□□ 2.31
TRIM8-201ENST00000302424 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
TRIM8-201ENST00000302424 PPARGC1BQ86YN6 1023 aaKnown RBP29.36■■■□□ 2.29
TRIM8-201ENST00000302424 ABCC9O60706 1549 aa29.32■■■□□ 2.28
TRIM8-201ENST00000302424 FAM9AQ8IZU1 332 aaPredicted RBP29.3■■■□□ 2.28
TRIM8-201ENST00000302424 RSF1Q96T23 1441 aaPredicted RBP29.3■■■□□ 2.28
TRIM8-201ENST00000302424 TRIM41Q8WV44 630 aa29.15■■■□□ 2.26
TRIM8-201ENST00000302424 RB1CC1Q8TDY2 1594 aa29.06■■■□□ 2.24
TRIM8-201ENST00000302424 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
TRIM8-201ENST00000302424 TRIM26Q12899 539 aaPredicted RBP28.86■■■□□ 2.21
TRIM8-201ENST00000302424 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
TRIM8-201ENST00000302424 NACADO15069 1562 aa28.7■■■□□ 2.18
TRIM8-201ENST00000302424 WIZO95785 1651 aa28.67■■■□□ 2.18
TRIM8-201ENST00000302424 TTBK1Q5TCY1 1321 aaPredicted RBP28.35■■■□□ 2.13
TRIM8-201ENST00000302424 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.124e-9■□□□□ 10.3
TRIM8-201ENST00000302424 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
TRIM8-201ENST00000302424 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
TRIM8-201ENST00000302424 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
TRIM8-201ENST00000302424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
TRIM8-201ENST00000302424 ZEB1P37275 1124 aaPredicted RBP28.02■■■□□ 2.08
TRIM8-201ENST00000302424 SMARCA4P51532 1647 aa28■■■□□ 2.07
TRIM8-201ENST00000302424 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
TRIM8-201ENST00000302424 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
TRIM8-201ENST00000302424 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.07
TRIM8-201ENST00000302424 SOGA1O94964 1423 aa27.95■■■□□ 2.07
TRIM8-201ENST00000302424 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
TRIM8-201ENST00000302424 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
TRIM8-201ENST00000302424 UBTFP17480 764 aaKnown RBP27.87■■■□□ 2.05
TRIM8-201ENST00000302424 CCER1Q8TC90 406 aaPredicted RBP27.85■■■□□ 2.05
TRIM8-201ENST00000302424 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
TRIM8-201ENST00000302424 RANGAP1P46060 587 aaPredicted RBP27.72■■■□□ 2.03
TRIM8-201ENST00000302424 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
TRIM8-201ENST00000302424 BICRAQ9NZM4 1560 aa27.66■■■□□ 2.02
TRIM8-201ENST00000302424 TNIKQ9UKE5 1360 aa27.52■■■□□ 2
TRIM8-201ENST00000302424 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
TRIM8-201ENST00000302424 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
TRIM8-201ENST00000302424 HNRNPUL2Q1KMD3 747 aaKnown RBP27.4■■□□□ 1.98
TRIM8-201ENST00000302424 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
TRIM8-201ENST00000302424 GOLGA3Q08378 1498 aa27.35■■□□□ 1.97
TRIM8-201ENST00000302424 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
TRIM8-201ENST00000302424 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
TRIM8-201ENST00000302424 EEA1Q15075 1411 aa27.31■■□□□ 1.96
TRIM8-201ENST00000302424 DIEXFQ68CQ4 756 aaKnown RBP27.26■■□□□ 1.96
TRIM8-201ENST00000302424 PEG3Q9GZU2 1588 aa27.21■■□□□ 1.95
TRIM8-201ENST00000302424 CLIP1P30622 1438 aa27.19■■□□□ 1.94
TRIM8-201ENST00000302424 RAPGEF2Q9Y4G8 1499 aa27.18■■□□□ 1.94
TRIM8-201ENST00000302424 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
TRIM8-201ENST00000302424 NEUROD1Q13562 356 aa27.12■■□□□ 1.93
TRIM8-201ENST00000302424 APLP2Q06481 763 aa27.11■■□□□ 1.93
TRIM8-201ENST00000302424 ACIN1Q9UKV3 1341 aaKnown RBP26.98■■□□□ 1.91
TRIM8-201ENST00000302424 KIF21BO75037 1637 aa26.98■■□□□ 1.91
TRIM8-201ENST00000302424 YTHDC1Q96MU7 727 aaKnown RBP26.97■■□□□ 1.91
TRIM8-201ENST00000302424 VPS8Q8N3P4 1428 aa26.96■■□□□ 1.91
TRIM8-201ENST00000302424 ZNF316A6NFI3 1004 aaPredicted RBP26.94■■□□□ 1.9
TRIM8-201ENST00000302424 KANK4Q5T7N3 995 aaPredicted RBP26.87■■□□□ 1.89
TRIM8-201ENST00000302424 TOP2BQ02880 1626 aa26.86■■□□□ 1.89
TRIM8-201ENST00000302424 GTF3C3Q9Y5Q9 886 aa26.85■■□□□ 1.89
TRIM8-201ENST00000302424 ITGAEP38570 1179 aa26.78■■□□□ 1.88
TRIM8-201ENST00000302424 MIER1Q8N108 512 aa26.76■■□□□ 1.87
TRIM8-201ENST00000302424 CUX1P39880 1505 aa26.75■■□□□ 1.87
TRIM8-201ENST00000302424 CENPBP07199 599 aaPredicted RBP26.73■■□□□ 1.87
TRIM8-201ENST00000302424 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
TRIM8-201ENST00000302424 PRXQ9BXM0 1461 aa26.67■■□□□ 1.86
TRIM8-201ENST00000302424 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
TRIM8-201ENST00000302424 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
TRIM8-201ENST00000302424 KIF27Q86VH2 1401 aa26.61■■□□□ 1.85
TRIM8-201ENST00000302424 P3H3Q8IVL6 736 aa26.57■■□□□ 1.84
TRIM8-201ENST00000302424 HMGXB3Q12766 1538 aa26.54■■□□□ 1.84
TRIM8-201ENST00000302424 CFTRP13569 1480 aa26.54■■□□□ 1.84
TRIM8-201ENST00000302424 PHF23Q9BUL5 403 aaPredicted RBP26.53■■□□□ 1.84
TRIM8-201ENST00000302424 ATP1B4Q9UN42 357 aaPredicted RBP26.53■■□□□ 1.84
TRIM8-201ENST00000302424 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
TRIM8-201ENST00000302424 CUX2O14529 1486 aa26.49■■□□□ 1.83
TRIM8-201ENST00000302424 DHX57Q6P158 1386 aaKnown RBP26.48■■□□□ 1.83
TRIM8-201ENST00000302424 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
TRIM8-201ENST00000302424 IGF1RP08069 1367 aa26.42■■□□□ 1.82
TRIM8-201ENST00000302424 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
TRIM8-201ENST00000302424 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.81
TRIM8-201ENST00000302424 CARMIL1Q5VZK9 1371 aa26.32■■□□□ 1.8
TRIM8-201ENST00000302424 PELP1Q8IZL8 1130 aaKnown RBP26.31■■□□□ 1.8
TRIM8-201ENST00000302424 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
TRIM8-201ENST00000302424 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
TRIM8-201ENST00000302424 RRBP1Q9P2E9 1410 aaKnown RBP26.26■■□□□ 1.8
TRIM8-201ENST00000302424 RAD54L2Q9Y4B4 1467 aa26.21■■□□□ 1.79
TRIM8-201ENST00000302424 RAB3GAP2Q9H2M9 1393 aa26.19■■□□□ 1.78
TRIM8-201ENST00000302424 SIN3AQ96ST3 1273 aa26.17■■□□□ 1.78
TRIM8-201ENST00000302424 NESP48681 1621 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms