Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHCHD1Q96BP2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CHCHD1Q96BP2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC24.61■■□□□ 1.53
CHCHD1Q96BP2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CHCHD1Q96BP2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHCHD1Q96BP2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHCHD1Q96BP2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHCHD1Q96BP2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.93■■□□□ 1.42
CHCHD1Q96BP2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHCHD1Q96BP2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CHCHD1Q96BP2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC23.68■■□□□ 1.38
CHCHD1Q96BP2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHCHD1Q96BP2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.59■■□□□ 1.37
CHCHD1Q96BP2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
CHCHD1Q96BP2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.25■■□□□ 1.31
CHCHD1Q96BP2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHCHD1Q96BP2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CHCHD1Q96BP2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHCHD1Q96BP2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CHCHD1Q96BP2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.92■■□□□ 1.26
CHCHD1Q96BP2 AL356512.1-201ENST00000607453 1739 ntBASIC22.89■■□□□ 1.26
CHCHD1Q96BP2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHCHD1Q96BP2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHCHD1Q96BP2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHCHD1Q96BP2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.82■■□□□ 1.24
CHCHD1Q96BP2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHCHD1Q96BP2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHCHD1Q96BP2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHCHD1Q96BP2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHCHD1Q96BP2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHCHD1Q96BP2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHCHD1Q96BP2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CHCHD1Q96BP2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHCHD1Q96BP2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHCHD1Q96BP2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHCHD1Q96BP2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHCHD1Q96BP2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHCHD1Q96BP2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHCHD1Q96BP2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CHCHD1Q96BP2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CHCHD1Q96BP2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHCHD1Q96BP2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHCHD1Q96BP2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CHCHD1Q96BP2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
CHCHD1Q96BP2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CHCHD1Q96BP2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHCHD1Q96BP2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHCHD1Q96BP2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHCHD1Q96BP2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHCHD1Q96BP2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.04■■□□□ 1.12
CHCHD1Q96BP2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.03■■□□□ 1.12
CHCHD1Q96BP2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.03■■□□□ 1.12
CHCHD1Q96BP2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHCHD1Q96BP2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHCHD1Q96BP2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHCHD1Q96BP2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CHCHD1Q96BP2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CHCHD1Q96BP2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHCHD1Q96BP2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHCHD1Q96BP2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.83■■□□□ 1.09
CHCHD1Q96BP2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHCHD1Q96BP2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHCHD1Q96BP2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CHCHD1Q96BP2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CHCHD1Q96BP2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHCHD1Q96BP2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.76■■□□□ 1.07
CHCHD1Q96BP2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.76■■□□□ 1.07
CHCHD1Q96BP2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHCHD1Q96BP2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHCHD1Q96BP2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC21.67■■□□□ 1.06
CHCHD1Q96BP2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.67■■□□□ 1.06
CHCHD1Q96BP2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC21.64■■□□□ 1.05
CHCHD1Q96BP2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHCHD1Q96BP2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
CHCHD1Q96BP2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CHCHD1Q96BP2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHCHD1Q96BP2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHCHD1Q96BP2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHCHD1Q96BP2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHCHD1Q96BP2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHCHD1Q96BP2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHCHD1Q96BP2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.48■■□□□ 1.03
CHCHD1Q96BP2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHCHD1Q96BP2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHCHD1Q96BP2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHCHD1Q96BP2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
CHCHD1Q96BP2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.44■■□□□ 1.02
CHCHD1Q96BP2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHCHD1Q96BP2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHCHD1Q96BP2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CHCHD1Q96BP2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHCHD1Q96BP2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.4■■□□□ 1.02
CHCHD1Q96BP2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHCHD1Q96BP2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHCHD1Q96BP2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.37■■□□□ 1.01
CHCHD1Q96BP2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHCHD1Q96BP2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CHCHD1Q96BP2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHCHD1Q96BP2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHCHD1Q96BP2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms