Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ZNF664-205ENST00000539257 271 ntTSL 514.51□□□□□ -0.092e-7■■□□□ 12.6
SRSF1Q07955 WDR13-206ENST00000479279 2486 ntTSL 1 (best)14.09□□□□□ -0.157e-8■■□□□ 12.6
SRSF1Q07955 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.222e-7■■□□□ 12.6
SRSF1Q07955 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.277e-8■■□□□ 12.6
SRSF1Q07955 WDR13-209ENST00000492715 2612 ntTSL 513.09□□□□□ -0.317e-8■■□□□ 12.6
SRSF1Q07955 ZNF664-203ENST00000537532 592 ntTSL 411.7□□□□□ -0.542e-7■■□□□ 12.6
SRSF1Q07955 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.552e-7■■□□□ 12.6
SRSF1Q07955 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.562e-7■■□□□ 12.6
SRSF1Q07955 HIRA-203ENST00000452818 453 ntTSL 511.1□□□□□ -0.631e-8■■□□□ 12.6
SRSF1Q07955 MAPK12-202ENST00000395778 605 ntTSL 1 (best) BASIC10.95□□□□□ -0.662e-7■■□□□ 12.6
SRSF1Q07955 RFLNA-204ENST00000545615 449 ntTSL 310.79□□□□□ -0.682e-7■■□□□ 12.6
SRSF1Q07955 C22orf39-204ENST00000509549 2979 ntTSL 210.11□□□□□ -0.791e-8■■□□□ 12.6
SRSF1Q07955 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.982e-7■■□□□ 12.6
SRSF1Q07955 FNDC3B-212ENST00000494000 2600 ntTSL 1 (best)5.64□□□□□ -1.512e-7■■□□□ 12.6
SRSF1Q07955 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.541e-8■■□□□ 12.6
SRSF1Q07955 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.821e-8■■□□□ 12.6
SRSF1Q07955 PFKL-205ENST00000466134 5986 ntTSL 216.86■□□□□ 0.295e-7■■□□□ 12.6
SRSF1Q07955 PFKL-207ENST00000474114 6007 ntTSL 1 (best)15.49■□□□□ 0.075e-7■■□□□ 12.6
SRSF1Q07955 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.285e-7■■□□□ 12.6
SRSF1Q07955 PFKL-202ENST00000397961 3390 ntTSL 1 (best)11.18□□□□□ -0.625e-7■■□□□ 12.6
SRSF1Q07955 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.97■□□□□ 0.311e-7■■□□□ 12.6
SRSF1Q07955 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.12□□□□□ -0.471e-7■■□□□ 12.6
SRSF1Q07955 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC7.38□□□□□ -1.231e-7■■□□□ 12.6
SRSF1Q07955 ARHGAP5-208ENST00000555814 583 ntTSL 47.17□□□□□ -1.261e-7■■□□□ 12.6
SRSF1Q07955 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.561e-7■■□□□ 12.6
SRSF1Q07955 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.631e-7■■□□□ 12.6
SRSF1Q07955 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.071e-7■■□□□ 12.6
SRSF1Q07955 TRMU-204ENST00000441818 1793 ntTSL 1 (best)17.63■□□□□ 0.412e-10■■□□□ 12.6
SRSF1Q07955 TRMU-206ENST00000456595 1688 ntTSL 1 (best)17.53■□□□□ 0.42e-10■■□□□ 12.6
SRSF1Q07955 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.41■□□□□ 0.382e-10■■□□□ 12.6
SRSF1Q07955 TRMU-205ENST00000453630 1775 ntTSL 217.28■□□□□ 0.362e-10■■□□□ 12.6
SRSF1Q07955 TRMU-203ENST00000381021 1830 ntTSL 217.2■□□□□ 0.342e-10■■□□□ 12.6
SRSF1Q07955 TRMU-207ENST00000457572 1882 ntTSL 216.8■□□□□ 0.282e-10■■□□□ 12.6
SRSF1Q07955 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.162e-10■■□□□ 12.6
SRSF1Q07955 TRMU-210ENST00000470831 1860 ntTSL 213.93□□□□□ -0.182e-10■■□□□ 12.6
SRSF1Q07955 TRMU-216ENST00000491612 2933 ntTSL 211.11□□□□□ -0.632e-10■■□□□ 12.6
SRSF1Q07955 TRMU-214ENST00000485559 2653 ntTSL 211.09□□□□□ -0.632e-10■■□□□ 12.6
SRSF1Q07955 TOP3B-205ENST00000434517 736 ntTSL 519.62■□□□□ 0.738e-10■■□□□ 12.6
SRSF1Q07955 TOP3B-204ENST00000430142 582 ntTSL 214.92□□□□□ -0.028e-10■■□□□ 12.6
SRSF1Q07955 TOP3B-211ENST00000449704 543 ntTSL 314.37□□□□□ -0.118e-10■■□□□ 12.6
SRSF1Q07955 TOP3B-207ENST00000437103 571 ntTSL 411.5□□□□□ -0.578e-10■■□□□ 12.6
SRSF1Q07955 TOP3B-212ENST00000456075 561 ntTSL 49.48□□□□□ -0.898e-10■■□□□ 12.6
SRSF1Q07955 TOP3B-208ENST00000437929 550 ntTSL 47.11□□□□□ -1.278e-10■■□□□ 12.6
SRSF1Q07955 KPNB1-210ENST00000580573 556 ntTSL 36.7□□□□□ -1.345e-12■■□□□ 12.6
SRSF1Q07955 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-8■■□□□ 12.6
SRSF1Q07955 WDR13-203ENST00000466962 684 ntTSL 315.48■□□□□ 0.077e-8■■□□□ 12.6
SRSF1Q07955 EPS8L2-213ENST00000529346 1718 ntTSL 219.12■□□□□ 0.656e-7■■□□□ 12.6
SRSF1Q07955 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.71e-7■■□□□ 12.6
SRSF1Q07955 HIST1H2BJ-202ENST00000606923 408 ntTSL 37.11□□□□□ -1.271e-7■■□□□ 12.6
SRSF1Q07955 CROCCP2-203ENST00000635081 1904 ntTSL 516.16■□□□□ 0.183e-9■■□□□ 12.6
SRSF1Q07955 CROCCP2-202ENST00000412962 2773 ntBASIC13.65□□□□□ -0.223e-9■■□□□ 12.6
SRSF1Q07955 CROCCP2-204ENST00000639456 2575 ntTSL 513.55□□□□□ -0.243e-9■■□□□ 12.6
SRSF1Q07955 YARS-204ENST00000470377 782 ntTSL 37.63□□□□□ -1.192e-6■■□□□ 12.6
SRSF1Q07955 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.41e-7■■□□□ 12.6
SRSF1Q07955 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.461e-7■■□□□ 12.6
SRSF1Q07955 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.76■■□□□ 1.553e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-205ENST00000467980 899 ntTSL 324.3■■□□□ 1.483e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-206ENST00000469309 910 ntTSL 223.75■■□□□ 1.393e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-219ENST00000522266 480 ntTSL 221.18■□□□□ 0.983e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-215ENST00000495535 672 ntTSL 321.18■□□□□ 0.983e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-213ENST00000488943 1262 ntTSL 520.88■□□□□ 0.933e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-208ENST00000475514 1192 ntTSL 520.45■□□□□ 0.863e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-207ENST00000473391 1064 ntTSL 220.22■□□□□ 0.833e-6■■□□□ 12.6
SRSF1Q07955 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.633e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.98■□□□□ 0.633e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.75■□□□□ 0.593e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.573e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-218ENST00000519397 583 ntTSL 415.71■□□□□ 0.113e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.173e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.87□□□□□ -0.513e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.513e-6■■□□□ 12.6
SRSF1Q07955 REPIN1-212ENST00000487455 464 ntTSL 49.73□□□□□ -0.853e-6■■□□□ 12.6
SRSF1Q07955 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.62□□□□□ -0.558e-8■■□□□ 12.6
SRSF1Q07955 NEAT1-202ENST00000501122 22743 ntBASIC4.08□□□□□ -1.762e-10■■□□□ 12.6
SRSF1Q07955 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.442e-9■■□□□ 12.6
SRSF1Q07955 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.22□□□□□ -0.452e-9■■□□□ 12.6
SRSF1Q07955 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.56□□□□□ -0.722e-9■■□□□ 12.6
SRSF1Q07955 NUP98-205ENST00000397007 3698 ntTSL 1 (best) BASIC9.58□□□□□ -0.882e-9■■□□□ 12.6
SRSF1Q07955 NUP98-206ENST00000397013 939 ntTSL 58.17□□□□□ -1.12e-9■■□□□ 12.6
SRSF1Q07955 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC6.63□□□□□ -1.352e-9■■□□□ 12.6
SRSF1Q07955 NUP98-216ENST00000529379 536 ntTSL 35.33□□□□□ -1.562e-9■■□□□ 12.6
SRSF1Q07955 GATC-202ENST00000548171 931 ntTSL 220.09■□□□□ 0.819e-7■■□□□ 12.6
SRSF1Q07955 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.19e-7■■□□□ 12.6
SRSF1Q07955 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.739e-7■■□□□ 12.6
SRSF1Q07955 EML4-207ENST00000480320 1932 ntTSL 24.79□□□□□ -1.641e-11■■□□□ 12.6
SRSF1Q07955 STX16-210ENST00000458280 553 ntTSL 420.83■□□□□ 0.932e-10■■□□□ 12.6
SRSF1Q07955 STX16-201ENST00000312283 785 ntTSL 315.48■□□□□ 0.072e-10■■□□□ 12.6
SRSF1Q07955 STX16-217ENST00000490700 661 ntTSL 315.3■□□□□ 0.042e-10■■□□□ 12.6
SRSF1Q07955 STX16-208ENST00000412911 560 ntTSL 414.73□□□□□ -0.052e-10■■□□□ 12.6
SRSF1Q07955 STX16-215ENST00000476384 936 ntTSL 514.18□□□□□ -0.142e-10■■□□□ 12.6
SRSF1Q07955 STX16-216ENST00000483434 874 ntTSL 313.91□□□□□ -0.182e-10■■□□□ 12.6
SRSF1Q07955 STX16-211ENST00000460655 572 ntTSL 412.49□□□□□ -0.412e-10■■□□□ 12.6
SRSF1Q07955 STX16-220ENST00000496117 528 ntTSL 511.27□□□□□ -0.612e-10■■□□□ 12.6
SRSF1Q07955 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.632e-10■■□□□ 12.6
SRSF1Q07955 STX16-202ENST00000355957 4897 ntTSL 2 BASIC10.12□□□□□ -0.792e-10■■□□□ 12.6
SRSF1Q07955 STX16-205ENST00000361830 4318 ntTSL 5 BASIC9.63□□□□□ -0.872e-10■■□□□ 12.6
SRSF1Q07955 STX16-204ENST00000359617 4273 ntTSL 5 BASIC8.07□□□□□ -1.122e-10■■□□□ 12.6
SRSF1Q07955 HJURP-208ENST00000453122 634 ntTSL 415.88■□□□□ 0.132e-6■■□□□ 12.6
SRSF1Q07955 HJURP-203ENST00000414924 1776 ntAPPRIS ALT2 TSL 415.75■□□□□ 0.112e-6■■□□□ 12.6
SRSF1Q07955 HJURP-209ENST00000454020 806 ntTSL 511.24□□□□□ -0.612e-6■■□□□ 12.6
Retrieved 100 of 14,836 protein–RNA pairs in 137.4 ms