RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
TOP3B-204ENST00000430142 ABCC9O60706 1549 aa34.13■■■■□ 3.05
TOP3B-204ENST00000430142 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
TOP3B-204ENST00000430142 RB1CC1Q8TDY2 1594 aa32.37■■■□□ 2.77
TOP3B-204ENST00000430142 DNAJC5BQ9UF47 199 aa32.18■■■□□ 2.74
TOP3B-204ENST00000430142 NACADO15069 1562 aa32.13■■■□□ 2.73
TOP3B-204ENST00000430142 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
TOP3B-204ENST00000430142 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
TOP3B-204ENST00000430142 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
TOP3B-204ENST00000430142 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
TOP3B-204ENST00000430142 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
TOP3B-204ENST00000430142 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
TOP3B-204ENST00000430142 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
TOP3B-204ENST00000430142 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
TOP3B-204ENST00000430142 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
TOP3B-204ENST00000430142 CC2D2AQ9P2K1 1620 aa30.78■■■□□ 2.52
TOP3B-204ENST00000430142 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
TOP3B-204ENST00000430142 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
TOP3B-204ENST00000430142 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
TOP3B-204ENST00000430142 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
TOP3B-204ENST00000430142 ATAD2BQ9ULI0 1458 aa29.59■■■□□ 2.33
TOP3B-204ENST00000430142 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
TOP3B-204ENST00000430142 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
TOP3B-204ENST00000430142 ERCC6Q03468 1493 aa29.45■■■□□ 2.31
TOP3B-204ENST00000430142 HMGXB3Q12766 1538 aa29.41■■■□□ 2.3
TOP3B-204ENST00000430142 CUX2O14529 1486 aa29.41■■■□□ 2.3
TOP3B-204ENST00000430142 BAZ1AQ9NRL2 1556 aaPredicted RBP29.34■■■□□ 2.29
TOP3B-204ENST00000430142 NESP48681 1621 aa29.29■■■□□ 2.28
TOP3B-204ENST00000430142 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
TOP3B-204ENST00000430142 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
TOP3B-204ENST00000430142 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
TOP3B-204ENST00000430142 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
TOP3B-204ENST00000430142 THOC2Q8NI27 1593 aaKnown RBP28.95■■■□□ 2.22
TOP3B-204ENST00000430142 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
TOP3B-204ENST00000430142 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
TOP3B-204ENST00000430142 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
TOP3B-204ENST00000430142 WIZO95785 1651 aa28.79■■■□□ 2.2
TOP3B-204ENST00000430142 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
TOP3B-204ENST00000430142 WDR62O43379 1518 aa28.53■■■□□ 2.16
TOP3B-204ENST00000430142 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
TOP3B-204ENST00000430142 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
TOP3B-204ENST00000430142 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
TOP3B-204ENST00000430142 CFTRP13569 1480 aa28.44■■■□□ 2.14
TOP3B-204ENST00000430142 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.14
TOP3B-204ENST00000430142 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
TOP3B-204ENST00000430142 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
TOP3B-204ENST00000430142 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
TOP3B-204ENST00000430142 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
TOP3B-204ENST00000430142 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
TOP3B-204ENST00000430142 IFT140Q96RY7 1462 aa27.93■■■□□ 2.06
TOP3B-204ENST00000430142 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
TOP3B-204ENST00000430142 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
TOP3B-204ENST00000430142 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
TOP3B-204ENST00000430142 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
TOP3B-204ENST00000430142 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
TOP3B-204ENST00000430142 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.03
TOP3B-204ENST00000430142 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.03
TOP3B-204ENST00000430142 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.03
TOP3B-204ENST00000430142 AQRO60306 1485 aaKnown RBP eCLIP27.68■■■□□ 2.024e-7■■■■□ 22.6
TOP3B-204ENST00000430142 TARBP1Q13395 1621 aaKnown RBP27.65■■■□□ 2.02
TOP3B-204ENST00000430142 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
TOP3B-204ENST00000430142 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
TOP3B-204ENST00000430142 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
TOP3B-204ENST00000430142 FBLN2P98095 1184 aa27.55■■■□□ 2
TOP3B-204ENST00000430142 SOGA1O94964 1423 aa27.52■■■□□ 2
TOP3B-204ENST00000430142 CHD1O14646 1710 aa27.51■■□□□ 1.99
TOP3B-204ENST00000430142 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
TOP3B-204ENST00000430142 CYB5RLQ6IPT4 315 aa27.5■■□□□ 1.99
TOP3B-204ENST00000430142 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
TOP3B-204ENST00000430142 CUX1P39880 1505 aa27.39■■□□□ 1.98
TOP3B-204ENST00000430142 SNAPC4Q5SXM2 1469 aa27.35■■□□□ 1.97
TOP3B-204ENST00000430142 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
TOP3B-204ENST00000430142 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
TOP3B-204ENST00000430142 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
TOP3B-204ENST00000430142 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
TOP3B-204ENST00000430142 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
TOP3B-204ENST00000430142 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
TOP3B-204ENST00000430142 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
TOP3B-204ENST00000430142 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
TOP3B-204ENST00000430142 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
TOP3B-204ENST00000430142 SYNJ2O15056 1496 aa27.18■■□□□ 1.94
TOP3B-204ENST00000430142 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
TOP3B-204ENST00000430142 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
TOP3B-204ENST00000430142 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
TOP3B-204ENST00000430142 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
TOP3B-204ENST00000430142 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
TOP3B-204ENST00000430142 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
TOP3B-204ENST00000430142 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
TOP3B-204ENST00000430142 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
TOP3B-204ENST00000430142 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
TOP3B-204ENST00000430142 ERCC6L2Q5T890 1561 aa26.83■■□□□ 1.89
TOP3B-204ENST00000430142 NUP160Q12769 1436 aa26.82■■□□□ 1.88
TOP3B-204ENST00000430142 CEP170Q5SW79 1584 aa26.81■■□□□ 1.88
TOP3B-204ENST00000430142 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
TOP3B-204ENST00000430142 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
TOP3B-204ENST00000430142 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
TOP3B-204ENST00000430142 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
TOP3B-204ENST00000430142 PRG4Q92954 1404 aaPredicted RBP26.61■■□□□ 1.85
TOP3B-204ENST00000430142 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
TOP3B-204ENST00000430142 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms