RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
KPNB1-210ENST00000580573 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
KPNB1-210ENST00000580573 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
KPNB1-210ENST00000580573 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
KPNB1-210ENST00000580573 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
KPNB1-210ENST00000580573 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
KPNB1-210ENST00000580573 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
KPNB1-210ENST00000580573 ZCCHC6Q5VYS8 1495 aaKnown RBP15.67■□□□□ 0.1
KPNB1-210ENST00000580573 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
KPNB1-210ENST00000580573 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
KPNB1-210ENST00000580573 ABCC9O60706 1549 aa15.38■□□□□ 0.05
KPNB1-210ENST00000580573 NACADO15069 1562 aa15.25■□□□□ 0.03
KPNB1-210ENST00000580573 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
KPNB1-210ENST00000580573 FOXD1Q16676 465 aa15.09■□□□□ 0.01
KPNB1-210ENST00000580573 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
KPNB1-210ENST00000580573 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
KPNB1-210ENST00000580573 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
KPNB1-210ENST00000580573 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
KPNB1-210ENST00000580573 ADRA2BP18089 450 aa14.77□□□□□ -0.05
KPNB1-210ENST00000580573 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
KPNB1-210ENST00000580573 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
KPNB1-210ENST00000580573 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
KPNB1-210ENST00000580573 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
KPNB1-210ENST00000580573 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
KPNB1-210ENST00000580573 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
KPNB1-210ENST00000580573 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
KPNB1-210ENST00000580573 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
KPNB1-210ENST00000580573 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
KPNB1-210ENST00000580573 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
KPNB1-210ENST00000580573 WIZO95785 1651 aa14.25□□□□□ -0.13
KPNB1-210ENST00000580573 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
KPNB1-210ENST00000580573 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
KPNB1-210ENST00000580573 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
KPNB1-210ENST00000580573 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
KPNB1-210ENST00000580573 ATAD2BQ9ULI0 1458 aa14.12□□□□□ -0.15
KPNB1-210ENST00000580573 HMGXB3Q12766 1538 aa14.08□□□□□ -0.16
KPNB1-210ENST00000580573 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
KPNB1-210ENST00000580573 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
KPNB1-210ENST00000580573 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
KPNB1-210ENST00000580573 KCNA4P22459 653 aa13.92□□□□□ -0.18
KPNB1-210ENST00000580573 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
KPNB1-210ENST00000580573 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
KPNB1-210ENST00000580573 MSH5O43196 834 aa13.85□□□□□ -0.19
KPNB1-210ENST00000580573 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
KPNB1-210ENST00000580573 CFTRP13569 1480 aa13.69□□□□□ -0.22
KPNB1-210ENST00000580573 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
KPNB1-210ENST00000580573 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
KPNB1-210ENST00000580573 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
KPNB1-210ENST00000580573 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
KPNB1-210ENST00000580573 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
KPNB1-210ENST00000580573 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
KPNB1-210ENST00000580573 BIVM-ERCC5R4GMW8 1640 aa13.54□□□□□ -0.24
KPNB1-210ENST00000580573 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
KPNB1-210ENST00000580573 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
KPNB1-210ENST00000580573 NESP48681 1621 aa13.5□□□□□ -0.25
KPNB1-210ENST00000580573 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
KPNB1-210ENST00000580573 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.25
KPNB1-210ENST00000580573 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
KPNB1-210ENST00000580573 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
KPNB1-210ENST00000580573 CUX1P39880 1505 aa13.44□□□□□ -0.26
KPNB1-210ENST00000580573 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
KPNB1-210ENST00000580573 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
KPNB1-210ENST00000580573 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
KPNB1-210ENST00000580573 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
KPNB1-210ENST00000580573 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
KPNB1-210ENST00000580573 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
KPNB1-210ENST00000580573 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
KPNB1-210ENST00000580573 URB2Q14146 1524 aaKnown RBP13.33□□□□□ -0.28
KPNB1-210ENST00000580573 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
KPNB1-210ENST00000580573 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
KPNB1-210ENST00000580573 EEA1Q15075 1411 aa13.3□□□□□ -0.28
KPNB1-210ENST00000580573 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
KPNB1-210ENST00000580573 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
KPNB1-210ENST00000580573 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
KPNB1-210ENST00000580573 WDR62O43379 1518 aa13.29□□□□□ -0.28
KPNB1-210ENST00000580573 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
KPNB1-210ENST00000580573 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
KPNB1-210ENST00000580573 SOGA1O94964 1423 aa13.25□□□□□ -0.29
KPNB1-210ENST00000580573 TARBP1Q13395 1621 aaKnown RBP13.22□□□□□ -0.29
KPNB1-210ENST00000580573 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
KPNB1-210ENST00000580573 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
KPNB1-210ENST00000580573 KIF21BO75037 1637 aa13.19□□□□□ -0.3
KPNB1-210ENST00000580573 ABCA5Q8WWZ7 1642 aa13.18□□□□□ -0.3
KPNB1-210ENST00000580573 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
KPNB1-210ENST00000580573 CUX2O14529 1486 aa13.16□□□□□ -0.3
KPNB1-210ENST00000580573 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
KPNB1-210ENST00000580573 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
KPNB1-210ENST00000580573 ERICH3Q5RHP9 1530 aa13.12□□□□□ -0.31
KPNB1-210ENST00000580573 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
KPNB1-210ENST00000580573 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
KPNB1-210ENST00000580573 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
KPNB1-210ENST00000580573 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
KPNB1-210ENST00000580573 CUL7Q14999 1698 aa13.09□□□□□ -0.31
KPNB1-210ENST00000580573 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
KPNB1-210ENST00000580573 PBRM1Q86U86 1689 aa13.08□□□□□ -0.31
KPNB1-210ENST00000580573 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
KPNB1-210ENST00000580573 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
KPNB1-210ENST00000580573 IGF1RP08069 1367 aa13.05□□□□□ -0.32
KPNB1-210ENST00000580573 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
KPNB1-210ENST00000580573 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms