RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 NISCHQ9Y2I1 1504 aa51.26■■■■■ 5.8
TOP3B-205ENST00000434517 CCDC180Q9P1Z9 1646 aa45.45■■■■■ 4.87
TOP3B-205ENST00000434517 ABCC9O60706 1549 aa44.1■■■■■ 4.65
TOP3B-205ENST00000434517 ZCCHC6Q5VYS8 1495 aaKnown RBP42.77■■■■■ 4.44
TOP3B-205ENST00000434517 DCAF8L2P0C7V8 631 aa42.75■■■■■ 4.43
TOP3B-205ENST00000434517 NACADO15069 1562 aa42.61■■■■■ 4.41
TOP3B-205ENST00000434517 RB1CC1Q8TDY2 1594 aa42.6■■■■■ 4.41
TOP3B-205ENST00000434517 MYO15BQ96JP2 1530 aa42.42■■■■■ 4.38
TOP3B-205ENST00000434517 DCAF1Q9Y4B6 1507 aa42.4■■■■■ 4.38
TOP3B-205ENST00000434517 DNAJC5BQ9UF47 199 aa42.28■■■■■ 4.36
TOP3B-205ENST00000434517 UNC13AQ9UPW8 1703 aa41.67■■■■■ 4.26
TOP3B-205ENST00000434517 SCRIBQ14160 1630 aa41.54■■■■■ 4.24
TOP3B-205ENST00000434517 PABPN1Q86U42 306 aaKnown RBP eCLIP41.26■■■■■ 4.2
TOP3B-205ENST00000434517 BICRAQ9NZM4 1560 aa41.25■■■■■ 4.19
TOP3B-205ENST00000434517 SHROOM4Q9ULL8 1493 aa40.84■■■■■ 4.13
TOP3B-205ENST00000434517 EIF4G1Q04637 1599 aaKnown RBP40.16■■■■■ 4.02
TOP3B-205ENST00000434517 CC2D2AQ9P2K1 1620 aa39.91■■■■□ 3.98
TOP3B-205ENST00000434517 CECR2Q9BXF3 1484 aa39.88■■■■□ 3.98
TOP3B-205ENST00000434517 BAZ1AQ9NRL2 1556 aaPredicted RBP39.73■■■■□ 3.95
TOP3B-205ENST00000434517 SMARCA4P51532 1647 aa39.73■■■■□ 3.95
TOP3B-205ENST00000434517 DNAJC5Q9H3Z4 198 aa39.65■■■■□ 3.94
TOP3B-205ENST00000434517 MROH2BQ7Z745 1585 aa39.52■■■■□ 3.92
TOP3B-205ENST00000434517 SMARCA2P51531 1590 aa39.38■■■■□ 3.9
TOP3B-205ENST00000434517 ATAD2BQ9ULI0 1458 aa39.37■■■■□ 3.89
TOP3B-205ENST00000434517 PEG3Q9GZU2 1588 aa39.28■■■■□ 3.88
TOP3B-205ENST00000434517 NCAPD3P42695 1498 aa39.27■■■■□ 3.88
TOP3B-205ENST00000434517 RSF1Q96T23 1441 aaPredicted RBP39.18■■■■□ 3.86
TOP3B-205ENST00000434517 WIZO95785 1651 aa39.16■■■■□ 3.86
TOP3B-205ENST00000434517 HMGXB3Q12766 1538 aa39.15■■■■□ 3.86
TOP3B-205ENST00000434517 BAZ1BQ9UIG0 1483 aaKnown RBP39.11■■■■□ 3.85
TOP3B-205ENST00000434517 TOP2AP11388 1531 aaKnown RBP38.74■■■■□ 3.79
TOP3B-205ENST00000434517 SUPT5HO00267 1087 aaKnown RBP38.55■■■■□ 3.76
TOP3B-205ENST00000434517 CUX2O14529 1486 aa38.53■■■■□ 3.76
TOP3B-205ENST00000434517 CCDC88BA6NC98 1476 aa38.26■■■■□ 3.72
TOP3B-205ENST00000434517 NESP48681 1621 aa38.26■■■■□ 3.71
TOP3B-205ENST00000434517 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
TOP3B-205ENST00000434517 ERCC6Q03468 1493 aa38.18■■■■□ 3.7
TOP3B-205ENST00000434517 CADPSQ9ULU8 1353 aa38.17■■■■□ 3.7
TOP3B-205ENST00000434517 CFTRP13569 1480 aa38.02■■■■□ 3.68
TOP3B-205ENST00000434517 PDS5BQ9NTI5 1447 aa37.95■■■■□ 3.67
TOP3B-205ENST00000434517 KIF21AQ7Z4S6 1674 aa37.88■■■■□ 3.65
TOP3B-205ENST00000434517 PRDM2Q13029 1718 aa37.87■■■■□ 3.65
TOP3B-205ENST00000434517 FANCD2Q9BXW9 1451 aa37.77■■■■□ 3.64
TOP3B-205ENST00000434517 CEP164Q9UPV0 1460 aa37.7■■■■□ 3.63
TOP3B-205ENST00000434517 THOC2Q8NI27 1593 aaKnown RBP37.61■■■■□ 3.61
TOP3B-205ENST00000434517 MRC2Q9UBG0 1479 aa37.55■■■■□ 3.6
TOP3B-205ENST00000434517 WDR62O43379 1518 aa37.41■■■■□ 3.58
TOP3B-205ENST00000434517 TRIM41Q8WV44 630 aa37.37■■■■□ 3.57
TOP3B-205ENST00000434517 URB2Q14146 1524 aaKnown RBP37.35■■■■□ 3.57
TOP3B-205ENST00000434517 ABCC8Q09428 1581 aa37.21■■■■□ 3.55
TOP3B-205ENST00000434517 DNMBPQ6XZF7 1577 aa37.21■■■■□ 3.55
TOP3B-205ENST00000434517 TOPBP1Q92547 1522 aa37.2■■■■□ 3.55
TOP3B-205ENST00000434517 CUX1P39880 1505 aa37.05■■■■□ 3.52
TOP3B-205ENST00000434517 WRNQ14191 1432 aaPredicted RBP eCLIP36.97■■■■□ 3.51
TOP3B-205ENST00000434517 POLA1P09884 1462 aaPredicted RBP36.9■■■■□ 3.5
TOP3B-205ENST00000434517 FGD5Q6ZNL6 1462 aa36.88■■■■□ 3.5
TOP3B-205ENST00000434517 IFT140Q96RY7 1462 aa36.88■■■■□ 3.49
TOP3B-205ENST00000434517 SYNJ1O43426 1573 aa36.87■■■■□ 3.49
TOP3B-205ENST00000434517 BIVM-ERCC5R4GMW8 1640 aa36.86■■■■□ 3.49
TOP3B-205ENST00000434517 TOP2BQ02880 1626 aa36.85■■■■□ 3.49
TOP3B-205ENST00000434517 SOGA1O94964 1423 aa36.76■■■■□ 3.48
TOP3B-205ENST00000434517 TARBP1Q13395 1621 aaKnown RBP36.76■■■■□ 3.48
TOP3B-205ENST00000434517 RAD54L2Q9Y4B4 1467 aa36.75■■■■□ 3.47
TOP3B-205ENST00000434517 ZNF608Q9ULD9 1512 aaPredicted RBP36.67■■■■□ 3.46
TOP3B-205ENST00000434517 OSCARQ8IYS5 282 aa36.6■■■■□ 3.45
TOP3B-205ENST00000434517 EIF4G3O43432 1585 aaKnown RBP36.58■■■■□ 3.45
TOP3B-205ENST00000434517 WDR97A6NE52 1622 aa36.58■■■■□ 3.45
TOP3B-205ENST00000434517 ABCA10Q8WWZ4 1543 aa36.53■■■■□ 3.44
TOP3B-205ENST00000434517 AQRO60306 1485 aaKnown RBP eCLIP36.51■■■■□ 3.441e-8■■■□□ 18.1
TOP3B-205ENST00000434517 TDRD9Q8NDG6 1382 aaKnown RBP36.51■■■■□ 3.43
TOP3B-205ENST00000434517 ABCA5Q8WWZ7 1642 aa36.37■■■■□ 3.41
TOP3B-205ENST00000434517 GAPVD1Q14C86 1478 aa36.36■■■■□ 3.41
TOP3B-205ENST00000434517 PBRM1Q86U86 1689 aa36.32■■■■□ 3.41
TOP3B-205ENST00000434517 GRIN2BQ13224 1484 aa36.3■■■■□ 3.4
TOP3B-205ENST00000434517 SNAPC4Q5SXM2 1469 aa36.21■■■■□ 3.39
TOP3B-205ENST00000434517 KIF27Q86VH2 1401 aa36.17■■■■□ 3.38
TOP3B-205ENST00000434517 MAGI1Q96QZ7 1491 aaPredicted RBP36.16■■■■□ 3.38
TOP3B-205ENST00000434517 CHIC1Q5VXU3 224 aa36.14■■■■□ 3.38
TOP3B-205ENST00000434517 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
TOP3B-205ENST00000434517 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
TOP3B-205ENST00000434517 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
TOP3B-205ENST00000434517 ERICH3Q5RHP9 1530 aa36.11■■■■□ 3.37
TOP3B-205ENST00000434517 CHD1O14646 1710 aa36.08■■■■□ 3.37
TOP3B-205ENST00000434517 FBLN2P98095 1184 aa36.06■■■■□ 3.36
TOP3B-205ENST00000434517 SYNJ2O15056 1496 aa36.01■■■■□ 3.36
TOP3B-205ENST00000434517 ADAMTS12P58397 1594 aa36.01■■■■□ 3.35
TOP3B-205ENST00000434517 CHMP7Q8WUX9 453 aaPredicted RBP35.99■■■■□ 3.35
TOP3B-205ENST00000434517 ARHGEF11O15085 1522 aa35.96■■■■□ 3.35
TOP3B-205ENST00000434517 RUSC2Q8N2Y8 1516 aa35.94■■■■□ 3.34
TOP3B-205ENST00000434517 FHAD1B1AJZ9 1412 aa35.94■■■■□ 3.34
TOP3B-205ENST00000434517 IGF1RP08069 1367 aa35.92■■■■□ 3.34
TOP3B-205ENST00000434517 CUL7Q14999 1698 aa35.9■■■■□ 3.34
TOP3B-205ENST00000434517 GRIN2AQ12879 1464 aa35.83■■■■□ 3.33
TOP3B-205ENST00000434517 CARMIL1Q5VZK9 1371 aa35.76■■■■□ 3.31
TOP3B-205ENST00000434517 CYB5RLQ6IPT4 315 aa35.75■■■■□ 3.31
TOP3B-205ENST00000434517 EEA1Q15075 1411 aa35.73■■■■□ 3.31
TOP3B-205ENST00000434517 TRHP20396 242 aaPredicted RBP35.66■■■■□ 3.3
TOP3B-205ENST00000434517 CEP170Q5SW79 1584 aa35.64■■■■□ 3.3
TOP3B-205ENST00000434517 FAM9AQ8IZU1 332 aaPredicted RBP35.64■■■■□ 3.3
TOP3B-205ENST00000434517 CLASP1Q7Z460 1538 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms