RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
NUP98-205ENST00000397007 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
NUP98-205ENST00000397007 ABCC9O60706 1549 aa22.18■■□□□ 1.14
NUP98-205ENST00000397007 ZCCHC6Q5VYS8 1495 aaKnown RBP22.14■■□□□ 1.13
NUP98-205ENST00000397007 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
NUP98-205ENST00000397007 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
NUP98-205ENST00000397007 NACADO15069 1562 aa21.91■■□□□ 1.1
NUP98-205ENST00000397007 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.07
NUP98-205ENST00000397007 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
NUP98-205ENST00000397007 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
NUP98-205ENST00000397007 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
NUP98-205ENST00000397007 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
NUP98-205ENST00000397007 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.93
NUP98-205ENST00000397007 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
NUP98-205ENST00000397007 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
NUP98-205ENST00000397007 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
NUP98-205ENST00000397007 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
NUP98-205ENST00000397007 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
NUP98-205ENST00000397007 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.85
NUP98-205ENST00000397007 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.85
NUP98-205ENST00000397007 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
NUP98-205ENST00000397007 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
NUP98-205ENST00000397007 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
NUP98-205ENST00000397007 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
NUP98-205ENST00000397007 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
NUP98-205ENST00000397007 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
NUP98-205ENST00000397007 WIZO95785 1651 aa20.13■□□□□ 0.81
NUP98-205ENST00000397007 RSF1Q96T23 1441 aaPredicted RBP20.11■□□□□ 0.81
NUP98-205ENST00000397007 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
NUP98-205ENST00000397007 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
NUP98-205ENST00000397007 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
NUP98-205ENST00000397007 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
NUP98-205ENST00000397007 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
NUP98-205ENST00000397007 CFTRP13569 1480 aa19.52■□□□□ 0.72
NUP98-205ENST00000397007 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
NUP98-205ENST00000397007 NESP48681 1621 aa19.43■□□□□ 0.7
NUP98-205ENST00000397007 THOC2Q8NI27 1593 aaKnown RBP19.42■□□□□ 0.7
NUP98-205ENST00000397007 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
NUP98-205ENST00000397007 WDR62O43379 1518 aa19.25■□□□□ 0.67
NUP98-205ENST00000397007 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
NUP98-205ENST00000397007 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
NUP98-205ENST00000397007 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
NUP98-205ENST00000397007 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
NUP98-205ENST00000397007 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
NUP98-205ENST00000397007 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
NUP98-205ENST00000397007 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
NUP98-205ENST00000397007 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
NUP98-205ENST00000397007 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
NUP98-205ENST00000397007 CUX2O14529 1486 aa19.05■□□□□ 0.64
NUP98-205ENST00000397007 CUX1P39880 1505 aa19.05■□□□□ 0.64
NUP98-205ENST00000397007 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
NUP98-205ENST00000397007 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.63
NUP98-205ENST00000397007 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
NUP98-205ENST00000397007 SYNJ1O43426 1573 aa19■□□□□ 0.63
NUP98-205ENST00000397007 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
NUP98-205ENST00000397007 ERCC6Q03468 1493 aa18.96■□□□□ 0.63
NUP98-205ENST00000397007 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
NUP98-205ENST00000397007 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
NUP98-205ENST00000397007 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
NUP98-205ENST00000397007 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
NUP98-205ENST00000397007 IFT140Q96RY7 1462 aa18.77■□□□□ 0.6
NUP98-205ENST00000397007 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.59
NUP98-205ENST00000397007 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
NUP98-205ENST00000397007 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
NUP98-205ENST00000397007 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
NUP98-205ENST00000397007 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.58
NUP98-205ENST00000397007 SOGA1O94964 1423 aa18.58■□□□□ 0.56
NUP98-205ENST00000397007 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
NUP98-205ENST00000397007 ADAMTS12P58397 1594 aa18.53■□□□□ 0.56
NUP98-205ENST00000397007 CHD1O14646 1710 aa18.5■□□□□ 0.55
NUP98-205ENST00000397007 CUL7Q14999 1698 aa18.5■□□□□ 0.55
NUP98-205ENST00000397007 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
NUP98-205ENST00000397007 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.54
NUP98-205ENST00000397007 AQRO60306 1485 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■□□ 18.3
NUP98-205ENST00000397007 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
NUP98-205ENST00000397007 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.53
NUP98-205ENST00000397007 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
NUP98-205ENST00000397007 SNAPC4Q5SXM2 1469 aa18.37■□□□□ 0.53
NUP98-205ENST00000397007 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
NUP98-205ENST00000397007 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
NUP98-205ENST00000397007 SHROOM2Q13796 1616 aa18.34■□□□□ 0.53
NUP98-205ENST00000397007 SYNJ2O15056 1496 aa18.34■□□□□ 0.53
NUP98-205ENST00000397007 KIF27Q86VH2 1401 aa18.33■□□□□ 0.52
NUP98-205ENST00000397007 IGF1RP08069 1367 aa18.33■□□□□ 0.52
NUP98-205ENST00000397007 PRXQ9BXM0 1461 aa18.32■□□□□ 0.52
NUP98-205ENST00000397007 KIF21BO75037 1637 aa18.31■□□□□ 0.52
NUP98-205ENST00000397007 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
NUP98-205ENST00000397007 EEA1Q15075 1411 aa18.29■□□□□ 0.52
NUP98-205ENST00000397007 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
NUP98-205ENST00000397007 NUP160Q12769 1436 aa18.28■□□□□ 0.52
NUP98-205ENST00000397007 CTTNBP2Q8WZ74 1663 aa18.27■□□□□ 0.52
NUP98-205ENST00000397007 GRIN2AQ12879 1464 aa18.27■□□□□ 0.51
NUP98-205ENST00000397007 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
NUP98-205ENST00000397007 RAPGEF2Q9Y4G8 1499 aa18.13■□□□□ 0.49
NUP98-205ENST00000397007 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.49
NUP98-205ENST00000397007 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
NUP98-205ENST00000397007 UGGT2Q9NYU1 1516 aa18.06■□□□□ 0.48
NUP98-205ENST00000397007 KIAA0586Q9BVV6 1533 aa18.05■□□□□ 0.48
NUP98-205ENST00000397007 IQGAP2Q13576 1575 aa18.04■□□□□ 0.48
NUP98-205ENST00000397007 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms