Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA4AP68366 AC243732.1-201ENST00000612648 864 ntBASIC18.12■□□□□ 0.49
TUBA4AP68366 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA4AP68366 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA4AP68366 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA4AP68366 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TUBA4AP68366 WIZP1-201ENST00000531444 2299 ntBASIC18.12■□□□□ 0.49
TUBA4AP68366 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TUBA4AP68366 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA4AP68366 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA4AP68366 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA4AP68366 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA4AP68366 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA4AP68366 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA4AP68366 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA4AP68366 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA4AP68366 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.11■□□□□ 0.49
TUBA4AP68366 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.11■□□□□ 0.49
TUBA4AP68366 AC016405.3-201ENST00000607710 860 ntBASIC18.11■□□□□ 0.49
TUBA4AP68366 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TUBA4AP68366 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA4AP68366 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA4AP68366 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TUBA4AP68366 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA4AP68366 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBA4AP68366 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA4AP68366 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TUBA4AP68366 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA4AP68366 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBA4AP68366 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.1■□□□□ 0.49
TUBA4AP68366 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBA4AP68366 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 PRORSD1P-202ENST00000563365 2154 ntBASIC18.1■□□□□ 0.49
TUBA4AP68366 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA4AP68366 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA4AP68366 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
TUBA4AP68366 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBA4AP68366 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TUBA4AP68366 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TUBA4AP68366 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBA4AP68366 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBA4AP68366 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TUBA4AP68366 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
TUBA4AP68366 AC007322.4-201ENST00000509611 723 ntBASIC18.09■□□□□ 0.49
TUBA4AP68366 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBA4AP68366 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TUBA4AP68366 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.09■□□□□ 0.49
TUBA4AP68366 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.09■□□□□ 0.49
TUBA4AP68366 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBA4AP68366 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBA4AP68366 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBA4AP68366 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TUBA4AP68366 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.08■□□□□ 0.49
TUBA4AP68366 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBA4AP68366 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms