RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 NISCHQ9Y2I1 1504 aa48.57■■■■■ 5.37
TSC22D3-205ENST00000372390 CCDC180Q9P1Z9 1646 aa42.94■■■■■ 4.46
TSC22D3-205ENST00000372390 ABCC9O60706 1549 aa41.34■■■■■ 4.21
TSC22D3-205ENST00000372390 ZCCHC6Q5VYS8 1495 aaKnown RBP40.63■■■■■ 4.09
TSC22D3-205ENST00000372390 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
TSC22D3-205ENST00000372390 DCAF1Q9Y4B6 1507 aa40.24■■■■■ 4.03
TSC22D3-205ENST00000372390 NACADO15069 1562 aa40.2■■■■■ 4.03
TSC22D3-205ENST00000372390 MYO15BQ96JP2 1530 aa40.17■■■■■ 4.02
TSC22D3-205ENST00000372390 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
TSC22D3-205ENST00000372390 SCRIBQ14160 1630 aa39.23■■■■□ 3.87
TSC22D3-205ENST00000372390 UNC13AQ9UPW8 1703 aa39.15■■■■□ 3.86
TSC22D3-205ENST00000372390 SHROOM4Q9ULL8 1493 aa39.08■■■■□ 3.85
TSC22D3-205ENST00000372390 BICRAQ9NZM4 1560 aa38.8■■■■□ 3.8
TSC22D3-205ENST00000372390 PABPN1Q86U42 306 aaKnown RBP eCLIP38.7■■■■□ 3.79
TSC22D3-205ENST00000372390 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.64
TSC22D3-205ENST00000372390 CECR2Q9BXF3 1484 aa37.73■■■■□ 3.63
TSC22D3-205ENST00000372390 BAZ1AQ9NRL2 1556 aaPredicted RBP37.64■■■■□ 3.62
TSC22D3-205ENST00000372390 SMARCA4P51532 1647 aa37.57■■■■□ 3.6
TSC22D3-205ENST00000372390 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
TSC22D3-205ENST00000372390 CC2D2AQ9P2K1 1620 aa37.43■■■■□ 3.58
TSC22D3-205ENST00000372390 RSF1Q96T23 1441 aaPredicted RBP37.32■■■■□ 3.57
TSC22D3-205ENST00000372390 DNAJC5BQ9UF47 199 aa37.23■■■■□ 3.55
TSC22D3-205ENST00000372390 SUPT5HO00267 1087 aaKnown RBP37.22■■■■□ 3.55
TSC22D3-205ENST00000372390 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
TSC22D3-205ENST00000372390 PEG3Q9GZU2 1588 aa37.19■■■■□ 3.54
TSC22D3-205ENST00000372390 ATAD2BQ9ULI0 1458 aa37.18■■■■□ 3.54
TSC22D3-205ENST00000372390 WIZO95785 1651 aa37.11■■■■□ 3.53
TSC22D3-205ENST00000372390 NCAPD3P42695 1498 aa37.05■■■■□ 3.52
TSC22D3-205ENST00000372390 HMGXB3Q12766 1538 aa36.99■■■■□ 3.51
TSC22D3-205ENST00000372390 BAZ1BQ9UIG0 1483 aaKnown RBP36.95■■■■□ 3.51
TSC22D3-205ENST00000372390 TOP2AP11388 1531 aaKnown RBP36.76■■■■□ 3.47
TSC22D3-205ENST00000372390 CCDC88BA6NC98 1476 aa36.28■■■■□ 3.4
TSC22D3-205ENST00000372390 LAMC3Q9Y6N6 1575 aa36.01■■■■□ 3.36
TSC22D3-205ENST00000372390 CADPSQ9ULU8 1353 aa36.01■■■■□ 3.36
TSC22D3-205ENST00000372390 NESP48681 1621 aa35.95■■■■□ 3.35
TSC22D3-205ENST00000372390 CFTRP13569 1480 aa35.94■■■■□ 3.34
TSC22D3-205ENST00000372390 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
TSC22D3-205ENST00000372390 PDS5BQ9NTI5 1447 aa35.75■■■■□ 3.31
TSC22D3-205ENST00000372390 ERCC6Q03468 1493 aa35.64■■■■□ 3.3
TSC22D3-205ENST00000372390 FANCD2Q9BXW9 1451 aa35.62■■■■□ 3.29
TSC22D3-205ENST00000372390 KIF21AQ7Z4S6 1674 aa35.58■■■■□ 3.29
TSC22D3-205ENST00000372390 CEP164Q9UPV0 1460 aa35.55■■■■□ 3.28
TSC22D3-205ENST00000372390 ABCC8Q09428 1581 aa35.35■■■■□ 3.25
TSC22D3-205ENST00000372390 MRC2Q9UBG0 1479 aa35.34■■■■□ 3.25
TSC22D3-205ENST00000372390 THOC2Q8NI27 1593 aaKnown RBP35.31■■■■□ 3.24
TSC22D3-205ENST00000372390 CHIC1Q5VXU3 224 aa35.28■■■■□ 3.24
TSC22D3-205ENST00000372390 URB2Q14146 1524 aaKnown RBP35.2■■■■□ 3.23
TSC22D3-205ENST00000372390 WDR62O43379 1518 aa35.2■■■■□ 3.23
TSC22D3-205ENST00000372390 DNMBPQ6XZF7 1577 aa35.16■■■■□ 3.22
TSC22D3-205ENST00000372390 WRNQ14191 1432 aaPredicted RBP eCLIP35.14■■■■□ 3.22
TSC22D3-205ENST00000372390 TOPBP1Q92547 1522 aa35.12■■■■□ 3.21
TSC22D3-205ENST00000372390 CUX1P39880 1505 aa35.09■■■■□ 3.21
TSC22D3-205ENST00000372390 SYNJ1O43426 1573 aa35.08■■■■□ 3.21
TSC22D3-205ENST00000372390 TRIM41Q8WV44 630 aa35.01■■■■□ 3.19
TSC22D3-205ENST00000372390 CUX2O14529 1486 aa35■■■■□ 3.19
TSC22D3-205ENST00000372390 TOP2BQ02880 1626 aa34.98■■■■□ 3.19
TSC22D3-205ENST00000372390 BIVM-ERCC5R4GMW8 1640 aa34.98■■■■□ 3.19
TSC22D3-205ENST00000372390 FGD5Q6ZNL6 1462 aa34.89■■■■□ 3.18
TSC22D3-205ENST00000372390 POLA1P09884 1462 aaPredicted RBP34.87■■■■□ 3.17
TSC22D3-205ENST00000372390 IFT140Q96RY7 1462 aa34.75■■■■□ 3.15
TSC22D3-205ENST00000372390 SOGA1O94964 1423 aa34.72■■■■□ 3.15
TSC22D3-205ENST00000372390 TARBP1Q13395 1621 aaKnown RBP34.68■■■■□ 3.14
TSC22D3-205ENST00000372390 RAD54L2Q9Y4B4 1467 aa34.68■■■■□ 3.14
TSC22D3-205ENST00000372390 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
TSC22D3-205ENST00000372390 WDR97A6NE52 1622 aa34.57■■■■□ 3.12
TSC22D3-205ENST00000372390 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
TSC22D3-205ENST00000372390 RUSC2Q8N2Y8 1516 aa34.46■■■■□ 3.11
TSC22D3-205ENST00000372390 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.11
TSC22D3-205ENST00000372390 TDRD9Q8NDG6 1382 aaKnown RBP34.43■■■■□ 3.1
TSC22D3-205ENST00000372390 FAM9AQ8IZU1 332 aaPredicted RBP34.41■■■■□ 3.1
TSC22D3-205ENST00000372390 ABCA5Q8WWZ7 1642 aa34.4■■■■□ 3.1
TSC22D3-205ENST00000372390 AQRO60306 1485 aaKnown RBP eCLIP34.38■■■■□ 3.09
TSC22D3-205ENST00000372390 KIF27Q86VH2 1401 aa34.36■■■■□ 3.09
TSC22D3-205ENST00000372390 GAPVD1Q14C86 1478 aa34.36■■■■□ 3.09
TSC22D3-205ENST00000372390 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
TSC22D3-205ENST00000372390 PBRM1Q86U86 1689 aa34.26■■■■□ 3.07
TSC22D3-205ENST00000372390 EEA1Q15075 1411 aa34.21■■■■□ 3.07
TSC22D3-205ENST00000372390 ERICH3Q5RHP9 1530 aa34.2■■■■□ 3.07
TSC22D3-205ENST00000372390 SNAPC4Q5SXM2 1469 aa34.13■■■■□ 3.05
TSC22D3-205ENST00000372390 CSRNP3Q8WYN3 585 aa34.13■■■■□ 3.05
TSC22D3-205ENST00000372390 MAGI1Q96QZ7 1491 aaPredicted RBP34.12■■■■□ 3.05
TSC22D3-205ENST00000372390 IGF1RP08069 1367 aa34.07■■■■□ 3.04
TSC22D3-205ENST00000372390 ADAMTS12P58397 1594 aa34.04■■■■□ 3.04
TSC22D3-205ENST00000372390 CUL7Q14999 1698 aa34.04■■■■□ 3.04
TSC22D3-205ENST00000372390 FHAD1B1AJZ9 1412 aa33.99■■■■□ 3.03
TSC22D3-205ENST00000372390 EHMT2Q96KQ7 1210 aa33.98■■■■□ 3.03
TSC22D3-205ENST00000372390 SYNJ2O15056 1496 aa33.97■■■■□ 3.03
TSC22D3-205ENST00000372390 LOC105371045A0A1W2PR82 267 aa33.94■■■■□ 3.02
TSC22D3-205ENST00000372390 CARMIL1Q5VZK9 1371 aa33.91■■■■□ 3.02
TSC22D3-205ENST00000372390 PRXQ9BXM0 1461 aa33.91■■■■□ 3.02
TSC22D3-205ENST00000372390 KIF21BO75037 1637 aa33.88■■■■□ 3.01
TSC22D3-205ENST00000372390 CHMP7Q8WUX9 453 aaPredicted RBP33.88■■■■□ 3.01
TSC22D3-205ENST00000372390 CHD1O14646 1710 aa33.87■■■■□ 3.01
TSC22D3-205ENST00000372390 FBLN2P98095 1184 aa33.86■■■■□ 3.01
TSC22D3-205ENST00000372390 RAPGEF2Q9Y4G8 1499 aa33.84■■■■□ 3.01
TSC22D3-205ENST00000372390 GRIN2AQ12879 1464 aa33.83■■■■□ 3.01
TSC22D3-205ENST00000372390 GOLGA3Q08378 1498 aa33.76■■■■□ 3
TSC22D3-205ENST00000372390 NUP160Q12769 1436 aa33.64■■■□□ 2.98
TSC22D3-205ENST00000372390 UBTFP17480 764 aaKnown RBP33.63■■■□□ 2.97
TSC22D3-205ENST00000372390 OSCARQ8IYS5 282 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms