RNA–Protein interactions for RNA: ENST00000479692.2

CDKN2A-205, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 5 BASIC

Gene CDKN2A, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-205ENST00000479692 NISCHQ9Y2I1 1504 aa48.63■■■■■ 5.37
CDKN2A-205ENST00000479692 CCDC180Q9P1Z9 1646 aa42.9■■■■■ 4.46
CDKN2A-205ENST00000479692 ABCC9O60706 1549 aa41.59■■■■■ 4.25
CDKN2A-205ENST00000479692 DCAF8L2P0C7V8 631 aa40.68■■■■■ 4.1
CDKN2A-205ENST00000479692 ZCCHC6Q5VYS8 1495 aaKnown RBP40.62■■■■■ 4.09
CDKN2A-205ENST00000479692 NACADO15069 1562 aa40.27■■■■■ 4.04
CDKN2A-205ENST00000479692 DCAF1Q9Y4B6 1507 aa40.25■■■■■ 4.03
CDKN2A-205ENST00000479692 RB1CC1Q8TDY2 1594 aa40.19■■■■■ 4.02
CDKN2A-205ENST00000479692 MYO15BQ96JP2 1530 aa40.19■■■■■ 4.02
CDKN2A-205ENST00000479692 SCRIBQ14160 1630 aa39.27■■■■□ 3.88
CDKN2A-205ENST00000479692 UNC13AQ9UPW8 1703 aa39.21■■■■□ 3.87
CDKN2A-205ENST00000479692 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
CDKN2A-205ENST00000479692 PABPN1Q86U42 306 aaKnown RBP eCLIP38.93■■■■□ 3.82
CDKN2A-205ENST00000479692 BICRAQ9NZM4 1560 aa38.82■■■■□ 3.8
CDKN2A-205ENST00000479692 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
CDKN2A-205ENST00000479692 EIF4G1Q04637 1599 aaKnown RBP37.8■■■■□ 3.64
CDKN2A-205ENST00000479692 CECR2Q9BXF3 1484 aa37.77■■■■□ 3.64
CDKN2A-205ENST00000479692 BAZ1AQ9NRL2 1556 aaPredicted RBP37.72■■■■□ 3.63
CDKN2A-205ENST00000479692 CC2D2AQ9P2K1 1620 aa37.69■■■■□ 3.62
CDKN2A-205ENST00000479692 SMARCA4P51532 1647 aa37.57■■■■□ 3.6
CDKN2A-205ENST00000479692 MROH2BQ7Z745 1585 aa37.45■■■■□ 3.59
CDKN2A-205ENST00000479692 SMARCA2P51531 1590 aa37.3■■■■□ 3.56
CDKN2A-205ENST00000479692 RSF1Q96T23 1441 aaPredicted RBP37.3■■■■□ 3.56
CDKN2A-205ENST00000479692 ATAD2BQ9ULI0 1458 aa37.25■■■■□ 3.55
CDKN2A-205ENST00000479692 PEG3Q9GZU2 1588 aa37.15■■■■□ 3.54
CDKN2A-205ENST00000479692 NCAPD3P42695 1498 aa37.13■■■■□ 3.54
CDKN2A-205ENST00000479692 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.53
CDKN2A-205ENST00000479692 SUPT5HO00267 1087 aaKnown RBP37.06■■■■□ 3.52
CDKN2A-205ENST00000479692 WIZO95785 1651 aa37.05■■■■□ 3.52
CDKN2A-205ENST00000479692 HMGXB3Q12766 1538 aa37■■■■□ 3.51
CDKN2A-205ENST00000479692 TOP2AP11388 1531 aaKnown RBP36.79■■■■□ 3.48
CDKN2A-205ENST00000479692 CCDC88BA6NC98 1476 aa36.35■■■■□ 3.41
CDKN2A-205ENST00000479692 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
CDKN2A-205ENST00000479692 LAMC3Q9Y6N6 1575 aa36.07■■■■□ 3.37
CDKN2A-205ENST00000479692 CFTRP13569 1480 aa36.01■■■■□ 3.36
CDKN2A-205ENST00000479692 NESP48681 1621 aa36■■■■□ 3.35
CDKN2A-205ENST00000479692 PDS5BQ9NTI5 1447 aa35.93■■■■□ 3.34
CDKN2A-205ENST00000479692 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
CDKN2A-205ENST00000479692 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
CDKN2A-205ENST00000479692 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
CDKN2A-205ENST00000479692 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
CDKN2A-205ENST00000479692 CUX2O14529 1486 aa35.62■■■■□ 3.29
CDKN2A-205ENST00000479692 KIF21AQ7Z4S6 1674 aa35.62■■■■□ 3.29
CDKN2A-205ENST00000479692 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.28
CDKN2A-205ENST00000479692 MRC2Q9UBG0 1479 aa35.44■■■■□ 3.26
CDKN2A-205ENST00000479692 ABCC8Q09428 1581 aa35.34■■■■□ 3.25
CDKN2A-205ENST00000479692 WRNQ14191 1432 aaPredicted RBP eCLIP35.25■■■■□ 3.23
CDKN2A-205ENST00000479692 URB2Q14146 1524 aaKnown RBP35.24■■■■□ 3.23
CDKN2A-205ENST00000479692 WDR62O43379 1518 aa35.22■■■■□ 3.23
CDKN2A-205ENST00000479692 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
CDKN2A-205ENST00000479692 TOPBP1Q92547 1522 aa35.18■■■■□ 3.22
CDKN2A-205ENST00000479692 CUX1P39880 1505 aa35.11■■■■□ 3.21
CDKN2A-205ENST00000479692 TRIM41Q8WV44 630 aa35.01■■■■□ 3.2
CDKN2A-205ENST00000479692 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
CDKN2A-205ENST00000479692 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
CDKN2A-205ENST00000479692 FGD5Q6ZNL6 1462 aa34.96■■■■□ 3.19
CDKN2A-205ENST00000479692 BIVM-ERCC5R4GMW8 1640 aa34.93■■■■□ 3.18
CDKN2A-205ENST00000479692 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
CDKN2A-205ENST00000479692 SOGA1O94964 1423 aa34.89■■■■□ 3.18
CDKN2A-205ENST00000479692 IFT140Q96RY7 1462 aa34.88■■■■□ 3.17
CDKN2A-205ENST00000479692 CHIC1Q5VXU3 224 aa34.83■■■■□ 3.17
CDKN2A-205ENST00000479692 RAD54L2Q9Y4B4 1467 aa34.77■■■■□ 3.16
CDKN2A-205ENST00000479692 DNAJC5Q9H3Z4 198 aa34.76■■■■□ 3.16
CDKN2A-205ENST00000479692 TARBP1Q13395 1621 aaKnown RBP34.65■■■■□ 3.14
CDKN2A-205ENST00000479692 ABCA10Q8WWZ4 1543 aa34.64■■■■□ 3.14
CDKN2A-205ENST00000479692 TDRD9Q8NDG6 1382 aaKnown RBP34.6■■■■□ 3.13
CDKN2A-205ENST00000479692 ZNF608Q9ULD9 1512 aaPredicted RBP34.55■■■■□ 3.12
CDKN2A-205ENST00000479692 KIF27Q86VH2 1401 aa34.53■■■■□ 3.12
CDKN2A-205ENST00000479692 WDR97A6NE52 1622 aa34.52■■■■□ 3.12
CDKN2A-205ENST00000479692 AQRO60306 1485 aaKnown RBP eCLIP34.51■■■■□ 3.11
CDKN2A-205ENST00000479692 GAPVD1Q14C86 1478 aa34.47■■■■□ 3.11
CDKN2A-205ENST00000479692 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.11
CDKN2A-205ENST00000479692 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
CDKN2A-205ENST00000479692 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
CDKN2A-205ENST00000479692 EEA1Q15075 1411 aa34.3■■■■□ 3.08
CDKN2A-205ENST00000479692 ERICH3Q5RHP9 1530 aa34.25■■■■□ 3.07
CDKN2A-205ENST00000479692 FAM9AQ8IZU1 332 aaPredicted RBP34.24■■■■□ 3.07
CDKN2A-205ENST00000479692 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
CDKN2A-205ENST00000479692 MAGI1Q96QZ7 1491 aaPredicted RBP34.22■■■■□ 3.07
CDKN2A-205ENST00000479692 PBRM1Q86U86 1689 aa34.22■■■■□ 3.07
CDKN2A-205ENST00000479692 RUSC2Q8N2Y8 1516 aa34.2■■■■□ 3.06
CDKN2A-205ENST00000479692 FBLN2P98095 1184 aa34.19■■■■□ 3.06
CDKN2A-205ENST00000479692 IGF1RP08069 1367 aa34.19■■■■□ 3.06
CDKN2A-205ENST00000479692 CHMP7Q8WUX9 453 aaPredicted RBP34.16■■■■□ 3.06
CDKN2A-205ENST00000479692 CSRNP3Q8WYN3 585 aa34.16■■■■□ 3.06
CDKN2A-205ENST00000479692 FHAD1B1AJZ9 1412 aa34.12■■■■□ 3.05
CDKN2A-205ENST00000479692 CARMIL1Q5VZK9 1371 aa34.08■■■■□ 3.05
CDKN2A-205ENST00000479692 SYNJ2O15056 1496 aa34.07■■■■□ 3.05
CDKN2A-205ENST00000479692 OSCARQ8IYS5 282 aa34.07■■■■□ 3.04
CDKN2A-205ENST00000479692 CUL7Q14999 1698 aa34.06■■■■□ 3.04
CDKN2A-205ENST00000479692 ADAMTS12P58397 1594 aa34.03■■■■□ 3.04
CDKN2A-205ENST00000479692 CHD1O14646 1710 aa33.95■■■■□ 3.03
CDKN2A-205ENST00000479692 RAPGEF2Q9Y4G8 1499 aa33.94■■■■□ 3.02
CDKN2A-205ENST00000479692 GRIN2AQ12879 1464 aa33.91■■■■□ 3.02
CDKN2A-205ENST00000479692 PRXQ9BXM0 1461 aa33.88■■■■□ 3.01
CDKN2A-205ENST00000479692 EHMT2Q96KQ7 1210 aa33.76■■■□□ 2.99
CDKN2A-205ENST00000479692 KIF21BO75037 1637 aa33.75■■■□□ 2.99
CDKN2A-205ENST00000479692 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
CDKN2A-205ENST00000479692 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
CDKN2A-205ENST00000479692 NUP160Q12769 1436 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms