RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 NISCHQ9Y2I1 1504 aa44.43■■■■■ 4.7
RAB5C-202ENST00000393860 CCDC180Q9P1Z9 1646 aa38.66■■■■□ 3.78
RAB5C-202ENST00000393860 ZCCHC6Q5VYS8 1495 aaKnown RBP37.33■■■■□ 3.57
RAB5C-202ENST00000393860 DCAF8L2P0C7V8 631 aa36.89■■■■□ 3.5
RAB5C-202ENST00000393860 ABCC9O60706 1549 aa36.7■■■■□ 3.47
RAB5C-202ENST00000393860 DCAF1Q9Y4B6 1507 aa36.6■■■■□ 3.45
RAB5C-202ENST00000393860 SHROOM4Q9ULL8 1493 aa36.54■■■■□ 3.44
RAB5C-202ENST00000393860 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
RAB5C-202ENST00000393860 NACADO15069 1562 aa35.98■■■■□ 3.35
RAB5C-202ENST00000393860 SCRIBQ14160 1630 aa35.76■■■■□ 3.32
RAB5C-202ENST00000393860 RB1CC1Q8TDY2 1594 aa35.7■■■■□ 3.31
RAB5C-202ENST00000393860 SUPT5HO00267 1087 aaKnown RBP35.13■■■■□ 3.21
RAB5C-202ENST00000393860 UNC13AQ9UPW8 1703 aa35.11■■■■□ 3.21
RAB5C-202ENST00000393860 BICRAQ9NZM4 1560 aa34.69■■■■□ 3.14
RAB5C-202ENST00000393860 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
RAB5C-202ENST00000393860 CECR2Q9BXF3 1484 aa34.63■■■■□ 3.13
RAB5C-202ENST00000393860 RSF1Q96T23 1441 aaPredicted RBP34.52■■■■□ 3.12
RAB5C-202ENST00000393860 MROH2BQ7Z745 1585 aa34.41■■■■□ 3.1
RAB5C-202ENST00000393860 BAZ1AQ9NRL2 1556 aaPredicted RBP34.28■■■■□ 3.08
RAB5C-202ENST00000393860 SMARCA4P51532 1647 aa34.18■■■■□ 3.06
RAB5C-202ENST00000393860 WIZO95785 1651 aa34.17■■■■□ 3.06
RAB5C-202ENST00000393860 TOP2AP11388 1531 aaKnown RBP33.71■■■□□ 2.99
RAB5C-202ENST00000393860 PEG3Q9GZU2 1588 aa33.65■■■□□ 2.98
RAB5C-202ENST00000393860 EIF4G1Q04637 1599 aaKnown RBP33.63■■■□□ 2.97
RAB5C-202ENST00000393860 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
RAB5C-202ENST00000393860 CHIC1Q5VXU3 224 aa33.56■■■□□ 2.96
RAB5C-202ENST00000393860 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
RAB5C-202ENST00000393860 BAZ1BQ9UIG0 1483 aaKnown RBP33.42■■■□□ 2.94
RAB5C-202ENST00000393860 CCDC88BA6NC98 1476 aa33.41■■■□□ 2.94
RAB5C-202ENST00000393860 NCAPD3P42695 1498 aa33.21■■■□□ 2.91
RAB5C-202ENST00000393860 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
RAB5C-202ENST00000393860 CC2D2AQ9P2K1 1620 aa33.16■■■□□ 2.9
RAB5C-202ENST00000393860 TRIM41Q8WV44 630 aa32.92■■■□□ 2.86
RAB5C-202ENST00000393860 ABCC8Q09428 1581 aa32.83■■■□□ 2.85
RAB5C-202ENST00000393860 CFTRP13569 1480 aa32.52■■■□□ 2.8
RAB5C-202ENST00000393860 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
RAB5C-202ENST00000393860 WRNQ14191 1432 aaPredicted RBP eCLIP32.49■■■□□ 2.79
RAB5C-202ENST00000393860 DNAJC5BQ9UF47 199 aa32.43■■■□□ 2.78
RAB5C-202ENST00000393860 SYNJ1O43426 1573 aa32.42■■■□□ 2.78
RAB5C-202ENST00000393860 CADPSQ9ULU8 1353 aa32.4■■■□□ 2.78
RAB5C-202ENST00000393860 PRDM2Q13029 1718 aa32.39■■■□□ 2.78
RAB5C-202ENST00000393860 LOC105371045A0A1W2PR82 267 aa32.39■■■□□ 2.78
RAB5C-202ENST00000393860 NESP48681 1621 aa32.26■■■□□ 2.75
RAB5C-202ENST00000393860 TOP2BQ02880 1626 aa32.2■■■□□ 2.75
RAB5C-202ENST00000393860 SOGA1O94964 1423 aa32.19■■■□□ 2.74
RAB5C-202ENST00000393860 BIVM-ERCC5R4GMW8 1640 aa32.17■■■□□ 2.74
RAB5C-202ENST00000393860 CUX1P39880 1505 aa32.16■■■□□ 2.74
RAB5C-202ENST00000393860 EHMT2Q96KQ7 1210 aa32.15■■■□□ 2.74
RAB5C-202ENST00000393860 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
RAB5C-202ENST00000393860 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
RAB5C-202ENST00000393860 LAMC3Q9Y6N6 1575 aa32.1■■■□□ 2.73
RAB5C-202ENST00000393860 EEA1Q15075 1411 aa31.94■■■□□ 2.7
RAB5C-202ENST00000393860 CEP164Q9UPV0 1460 aa31.88■■■□□ 2.69
RAB5C-202ENST00000393860 CSRNP3Q8WYN3 585 aa31.87■■■□□ 2.69
RAB5C-202ENST00000393860 KIF21AQ7Z4S6 1674 aa31.85■■■□□ 2.69
RAB5C-202ENST00000393860 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
RAB5C-202ENST00000393860 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
RAB5C-202ENST00000393860 FGD5Q6ZNL6 1462 aa31.8■■■□□ 2.68
RAB5C-202ENST00000393860 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
RAB5C-202ENST00000393860 URB2Q14146 1524 aaKnown RBP31.72■■■□□ 2.67
RAB5C-202ENST00000393860 KIF27Q86VH2 1401 aa31.63■■■□□ 2.65
RAB5C-202ENST00000393860 POLA1P09884 1462 aaPredicted RBP31.62■■■□□ 2.65
RAB5C-202ENST00000393860 CUX2O14529 1486 aa31.62■■■□□ 2.65
RAB5C-202ENST00000393860 GOLGA3Q08378 1498 aa31.62■■■□□ 2.65
RAB5C-202ENST00000393860 KIF21BO75037 1637 aa31.61■■■□□ 2.65
RAB5C-202ENST00000393860 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
RAB5C-202ENST00000393860 UBTFP17480 764 aaKnown RBP31.55■■■□□ 2.64
RAB5C-202ENST00000393860 RAPGEF2Q9Y4G8 1499 aa31.51■■■□□ 2.63
RAB5C-202ENST00000393860 TNIKQ9UKE5 1360 aa31.49■■■□□ 2.63
RAB5C-202ENST00000393860 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
RAB5C-202ENST00000393860 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
RAB5C-202ENST00000393860 PRXQ9BXM0 1461 aa31.43■■■□□ 2.62
RAB5C-202ENST00000393860 ERCC6Q03468 1493 aa31.41■■■□□ 2.62
RAB5C-202ENST00000393860 CEP162Q5TB80 1403 aa31.4■■■□□ 2.62
RAB5C-202ENST00000393860 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
RAB5C-202ENST00000393860 IGF1RP08069 1367 aa31.36■■■□□ 2.61
RAB5C-202ENST00000393860 ERICH3Q5RHP9 1530 aa31.35■■■□□ 2.61
RAB5C-202ENST00000393860 WDR62O43379 1518 aa31.3■■■□□ 2.6
RAB5C-202ENST00000393860 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
RAB5C-202ENST00000393860 TDRD9Q8NDG6 1382 aaKnown RBP31.26■■■□□ 2.59
RAB5C-202ENST00000393860 THOC2Q8NI27 1593 aaKnown RBP31.24■■■□□ 2.59
RAB5C-202ENST00000393860 ABCA5Q8WWZ7 1642 aa31.22■■■□□ 2.59
RAB5C-202ENST00000393860 CARMIL1Q5VZK9 1371 aa31.22■■■□□ 2.59
RAB5C-202ENST00000393860 RANGAP1P46060 587 aaPredicted RBP31.19■■■□□ 2.58
RAB5C-202ENST00000393860 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
RAB5C-202ENST00000393860 CLIP1P30622 1438 aa31.14■■■□□ 2.57
RAB5C-202ENST00000393860 CUL7Q14999 1698 aa31.1■■■□□ 2.57
RAB5C-202ENST00000393860 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
RAB5C-202ENST00000393860 AQRO60306 1485 aaKnown RBP eCLIP31.05■■■□□ 2.564e-6■■■■■ 31
RAB5C-202ENST00000393860 PBRM1Q86U86 1689 aa31.03■■■□□ 2.56
RAB5C-202ENST00000393860 ZNF608Q9ULD9 1512 aaPredicted RBP31.02■■■□□ 2.56
RAB5C-202ENST00000393860 PPARGC1BQ86YN6 1023 aaKnown RBP30.98■■■□□ 2.55
RAB5C-202ENST00000393860 PCGF6Q9BYE7 350 aa30.94■■■□□ 2.54
RAB5C-202ENST00000393860 EIF4G3O43432 1585 aaKnown RBP30.89■■■□□ 2.54
RAB5C-202ENST00000393860 GRIN2BQ13224 1484 aa30.87■■■□□ 2.53
RAB5C-202ENST00000393860 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
RAB5C-202ENST00000393860 VPS8Q8N3P4 1428 aa30.84■■■□□ 2.53
RAB5C-202ENST00000393860 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
RAB5C-202ENST00000393860 CTTNBP2Q8WZ74 1663 aa30.83■■■□□ 2.53
RAB5C-202ENST00000393860 ARHGAP35Q9NRY4 1499 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms