RNA–Protein interactions for RNA: ENST00000638450.1

UBXN2B-206, Transcript of UBX domain protein 2B, humanhuman

TSL 5 BASIC

Gene UBXN2B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-206ENST00000638450 NISCHQ9Y2I1 1504 aa50.84■■■■■ 5.73
UBXN2B-206ENST00000638450 CCDC180Q9P1Z9 1646 aa45.21■■■■■ 4.83
UBXN2B-206ENST00000638450 ABCC9O60706 1549 aa44.21■■■■■ 4.67
UBXN2B-206ENST00000638450 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.39
UBXN2B-206ENST00000638450 NACADO15069 1562 aa42.41■■■■■ 4.38
UBXN2B-206ENST00000638450 ZCCHC6Q5VYS8 1495 aaKnown RBP42.38■■■■■ 4.38
UBXN2B-206ENST00000638450 DCAF8L2P0C7V8 631 aa42.21■■■■■ 4.35
UBXN2B-206ENST00000638450 MYO15BQ96JP2 1530 aa42.17■■■■■ 4.34
UBXN2B-206ENST00000638450 DCAF1Q9Y4B6 1507 aa42.02■■■■■ 4.32
UBXN2B-206ENST00000638450 UNC13AQ9UPW8 1703 aa41.83■■■■■ 4.29
UBXN2B-206ENST00000638450 BICRAQ9NZM4 1560 aa41.42■■■■■ 4.22
UBXN2B-206ENST00000638450 SCRIBQ14160 1630 aa41.29■■■■■ 4.2
UBXN2B-206ENST00000638450 PABPN1Q86U42 306 aaKnown RBP eCLIP41.28■■■■■ 4.2
UBXN2B-206ENST00000638450 DNAJC5BQ9UF47 199 aa40.72■■■■■ 4.11
UBXN2B-206ENST00000638450 SHROOM4Q9ULL8 1493 aa40.67■■■■■ 4.1
UBXN2B-206ENST00000638450 EIF4G1Q04637 1599 aaKnown RBP40.18■■■■■ 4.02
UBXN2B-206ENST00000638450 CC2D2AQ9P2K1 1620 aa40.05■■■■■ 4
UBXN2B-206ENST00000638450 CECR2Q9BXF3 1484 aa39.71■■■■□ 3.95
UBXN2B-206ENST00000638450 SMARCA4P51532 1647 aa39.49■■■■□ 3.91
UBXN2B-206ENST00000638450 BAZ1AQ9NRL2 1556 aaPredicted RBP39.32■■■■□ 3.88
UBXN2B-206ENST00000638450 MROH2BQ7Z745 1585 aa39.26■■■■□ 3.88
UBXN2B-206ENST00000638450 ATAD2BQ9ULI0 1458 aa39.22■■■■□ 3.87
UBXN2B-206ENST00000638450 NCAPD3P42695 1498 aa39.16■■■■□ 3.86
UBXN2B-206ENST00000638450 PEG3Q9GZU2 1588 aa39.1■■■■□ 3.85
UBXN2B-206ENST00000638450 SMARCA2P51531 1590 aa39.08■■■■□ 3.85
UBXN2B-206ENST00000638450 HMGXB3Q12766 1538 aa38.99■■■■□ 3.83
UBXN2B-206ENST00000638450 WIZO95785 1651 aa38.87■■■■□ 3.81
UBXN2B-206ENST00000638450 BAZ1BQ9UIG0 1483 aaKnown RBP38.81■■■■□ 3.8
UBXN2B-206ENST00000638450 RSF1Q96T23 1441 aaPredicted RBP38.74■■■■□ 3.79
UBXN2B-206ENST00000638450 NESP48681 1621 aa38.37■■■■□ 3.73
UBXN2B-206ENST00000638450 TOP2AP11388 1531 aaKnown RBP38.35■■■■□ 3.73
UBXN2B-206ENST00000638450 LAMC3Q9Y6N6 1575 aa38.11■■■■□ 3.69
UBXN2B-206ENST00000638450 CADPSQ9ULU8 1353 aa37.96■■■■□ 3.67
UBXN2B-206ENST00000638450 KIF21AQ7Z4S6 1674 aa37.95■■■■□ 3.66
UBXN2B-206ENST00000638450 ERCC6Q03468 1493 aa37.93■■■■□ 3.66
UBXN2B-206ENST00000638450 CCDC88BA6NC98 1476 aa37.9■■■■□ 3.66
UBXN2B-206ENST00000638450 CFTRP13569 1480 aa37.81■■■■□ 3.64
UBXN2B-206ENST00000638450 THOC2Q8NI27 1593 aaKnown RBP37.8■■■■□ 3.64
UBXN2B-206ENST00000638450 PDS5BQ9NTI5 1447 aa37.73■■■■□ 3.63
UBXN2B-206ENST00000638450 PRDM2Q13029 1718 aa37.66■■■■□ 3.62
UBXN2B-206ENST00000638450 CUX2O14529 1486 aa37.6■■■■□ 3.61
UBXN2B-206ENST00000638450 SUPT5HO00267 1087 aaKnown RBP37.6■■■■□ 3.61
UBXN2B-206ENST00000638450 FANCD2Q9BXW9 1451 aa37.57■■■■□ 3.6
UBXN2B-206ENST00000638450 CEP164Q9UPV0 1460 aa37.48■■■■□ 3.59
UBXN2B-206ENST00000638450 MRC2Q9UBG0 1479 aa37.46■■■■□ 3.59
UBXN2B-206ENST00000638450 WDR62O43379 1518 aa37.41■■■■□ 3.58
UBXN2B-206ENST00000638450 URB2Q14146 1524 aaKnown RBP37.32■■■■□ 3.57
UBXN2B-206ENST00000638450 TOPBP1Q92547 1522 aa37.03■■■■□ 3.52
UBXN2B-206ENST00000638450 DNMBPQ6XZF7 1577 aa36.96■■■■□ 3.51
UBXN2B-206ENST00000638450 CUX1P39880 1505 aa36.82■■■■□ 3.48
UBXN2B-206ENST00000638450 ABCC8Q09428 1581 aa36.82■■■■□ 3.48
UBXN2B-206ENST00000638450 POLA1P09884 1462 aaPredicted RBP36.72■■■■□ 3.47
UBXN2B-206ENST00000638450 TARBP1Q13395 1621 aaKnown RBP36.71■■■■□ 3.47
UBXN2B-206ENST00000638450 ZNF608Q9ULD9 1512 aaPredicted RBP36.7■■■■□ 3.47
UBXN2B-206ENST00000638450 IFT140Q96RY7 1462 aa36.69■■■■□ 3.46
UBXN2B-206ENST00000638450 FGD5Q6ZNL6 1462 aa36.62■■■■□ 3.45
UBXN2B-206ENST00000638450 RAD54L2Q9Y4B4 1467 aa36.59■■■■□ 3.45
UBXN2B-206ENST00000638450 SYNJ1O43426 1573 aa36.53■■■■□ 3.44
UBXN2B-206ENST00000638450 EIF4G3O43432 1585 aaKnown RBP36.53■■■■□ 3.44
UBXN2B-206ENST00000638450 BIVM-ERCC5R4GMW8 1640 aa36.5■■■■□ 3.43
UBXN2B-206ENST00000638450 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
UBXN2B-206ENST00000638450 SOGA1O94964 1423 aa36.46■■■■□ 3.43
UBXN2B-206ENST00000638450 DNAJC5Q9H3Z4 198 aa36.46■■■■□ 3.43
UBXN2B-206ENST00000638450 TOP2BQ02880 1626 aa36.45■■■■□ 3.43
UBXN2B-206ENST00000638450 WRNQ14191 1432 aaPredicted RBP eCLIP36.42■■■■□ 3.42
UBXN2B-206ENST00000638450 AQRO60306 1485 aaKnown RBP eCLIP36.41■■■■□ 3.42
UBXN2B-206ENST00000638450 TDRD9Q8NDG6 1382 aaKnown RBP36.31■■■■□ 3.4
UBXN2B-206ENST00000638450 ABCA10Q8WWZ4 1543 aa36.24■■■■□ 3.39
UBXN2B-206ENST00000638450 ABCA5Q8WWZ7 1642 aa36.2■■■■□ 3.39
UBXN2B-206ENST00000638450 PBRM1Q86U86 1689 aa36.15■■■■□ 3.38
UBXN2B-206ENST00000638450 CHD1O14646 1710 aa36.14■■■■□ 3.38
UBXN2B-206ENST00000638450 SNAPC4Q5SXM2 1469 aa36.07■■■■□ 3.37
UBXN2B-206ENST00000638450 GAPVD1Q14C86 1478 aa36.05■■■■□ 3.36
UBXN2B-206ENST00000638450 GRIN2BQ13224 1484 aa36.04■■■■□ 3.36
UBXN2B-206ENST00000638450 MAGI1Q96QZ7 1491 aaPredicted RBP35.94■■■■□ 3.34
UBXN2B-206ENST00000638450 OSCARQ8IYS5 282 aa35.93■■■■□ 3.34
UBXN2B-206ENST00000638450 ADAMTS12P58397 1594 aa35.83■■■■□ 3.33
UBXN2B-206ENST00000638450 SYNJ2O15056 1496 aa35.82■■■■□ 3.32
UBXN2B-206ENST00000638450 ERICH3Q5RHP9 1530 aa35.77■■■■□ 3.32
UBXN2B-206ENST00000638450 FBLN2P98095 1184 aa35.76■■■■□ 3.32
UBXN2B-206ENST00000638450 CLASP1Q7Z460 1538 aa35.7■■■■□ 3.31
UBXN2B-206ENST00000638450 CHMP7Q8WUX9 453 aaPredicted RBP35.65■■■■□ 3.3
UBXN2B-206ENST00000638450 GRIN2AQ12879 1464 aa35.63■■■■□ 3.29
UBXN2B-206ENST00000638450 RIMBP3CA6NJZ7 1639 aa35.63■■■■□ 3.29
UBXN2B-206ENST00000638450 RIMBP3BA6NNM3 1639 aa35.63■■■■□ 3.29
UBXN2B-206ENST00000638450 RIMBP3Q9UFD9 1639 aa35.63■■■■□ 3.29
UBXN2B-206ENST00000638450 FHAD1B1AJZ9 1412 aa35.62■■■■□ 3.29
UBXN2B-206ENST00000638450 KIF27Q86VH2 1401 aa35.58■■■■□ 3.29
UBXN2B-206ENST00000638450 CEP170Q5SW79 1584 aa35.58■■■■□ 3.29
UBXN2B-206ENST00000638450 IGF1RP08069 1367 aa35.57■■■■□ 3.28
UBXN2B-206ENST00000638450 RUSC2Q8N2Y8 1516 aa35.57■■■■□ 3.28
UBXN2B-206ENST00000638450 ARHGEF11O15085 1522 aa35.56■■■■□ 3.28
UBXN2B-206ENST00000638450 NUP160Q12769 1436 aa35.5■■■■□ 3.27
UBXN2B-206ENST00000638450 CUL7Q14999 1698 aa35.46■■■■□ 3.27
UBXN2B-206ENST00000638450 TRIM41Q8WV44 630 aa35.41■■■■□ 3.26
UBXN2B-206ENST00000638450 ARAP1Q96P48 1450 aa35.33■■■■□ 3.25
UBXN2B-206ENST00000638450 SHROOM2Q13796 1616 aa35.32■■■■□ 3.25
UBXN2B-206ENST00000638450 ERCC6L2Q5T890 1561 aa35.32■■■■□ 3.24
UBXN2B-206ENST00000638450 CARMIL1Q5VZK9 1371 aa35.28■■■■□ 3.24
UBXN2B-206ENST00000638450 CHIC1Q5VXU3 224 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms