Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 NOP56-208ENST00000467857 735 ntTSL 210.1□□□□□ -0.791e-323■□□□□ 9.3
DKC1O60832 SNORD57-201ENST00000448188 72 ntBASIC-1.06□□□□□ -2.581e-323■□□□□ 9.3
DKC1O60832 ALB-204ENST00000441319 591 ntTSL 46.7□□□□□ -1.341e-58■□□□□ 9.2
DKC1O60832 ALB-217ENST00000514786 577 ntTSL 42.07□□□□□ -2.081e-58■□□□□ 9.2
DKC1O60832 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.06■□□□□ 0.84e-7■□□□□ 9.2
DKC1O60832 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.26■□□□□ 0.674e-7■□□□□ 9.2
DKC1O60832 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.24■□□□□ 0.674e-7■□□□□ 9.2
DKC1O60832 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.554e-10■□□□□ 9.2
DKC1O60832 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.014e-10■□□□□ 9.2
DKC1O60832 SNORD86-201ENST00000391196 86 ntBASIC9.44□□□□□ -0.92e-13■□□□□ 9.2
DKC1O60832 ARIH2-204ENST00000433170 560 ntTSL 422.55■■□□□ 1.25e-6■□□□□ 9.1
DKC1O60832 ARIH2-218ENST00000474936 695 ntTSL 222.55■■□□□ 1.25e-6■□□□□ 9.1
DKC1O60832 ARIH2-226ENST00000488963 517 ntTSL 322.55■■□□□ 1.25e-6■□□□□ 9.1
DKC1O60832 ARIH2-202ENST00000420814 884 ntTSL 320.69■□□□□ 0.95e-6■□□□□ 9.1
DKC1O60832 ARIH2-224ENST00000486316 406 ntTSL 420.69■□□□□ 0.95e-6■□□□□ 9.1
DKC1O60832 ARIH2-227ENST00000490095 1001 ntTSL 520.69■□□□□ 0.95e-6■□□□□ 9.1
DKC1O60832 ARIH2-230ENST00000495761 569 ntTSL 320.32■□□□□ 0.845e-6■□□□□ 9.1
DKC1O60832 ARIH2-219ENST00000478224 507 ntTSL 318.96■□□□□ 0.635e-6■□□□□ 9.1
DKC1O60832 ARIH2-206ENST00000449729 678 ntTSL 218.62■□□□□ 0.575e-6■□□□□ 9.1
DKC1O60832 ARIH2-217ENST00000474618 566 ntTSL 317.8■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 ARIH2-221ENST00000482427 556 ntTSL 417.8■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 ARIH2-222ENST00000483333 674 ntTSL 517.8■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 ARIH2-203ENST00000430423 753 ntTSL 217.7■□□□□ 0.425e-6■□□□□ 9.1
DKC1O60832 ARIH2-208ENST00000452882 598 ntTSL 317.7■□□□□ 0.425e-6■□□□□ 9.1
DKC1O60832 ARIH2-231ENST00000498314 649 ntTSL 417.7■□□□□ 0.425e-6■□□□□ 9.1
DKC1O60832 SPG7-204ENST00000561911 1025 ntTSL 517.61■□□□□ 0.415e-6■□□□□ 9.1
DKC1O60832 SPG7-218ENST00000568205 463 ntTSL 217.61■□□□□ 0.415e-6■□□□□ 9.1
DKC1O60832 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.295e-6■□□□□ 9.1
DKC1O60832 SPG7-213ENST00000566221 734 ntTSL 316.59■□□□□ 0.255e-6■□□□□ 9.1
DKC1O60832 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.215e-6■□□□□ 9.1
DKC1O60832 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.135e-6■□□□□ 9.1
DKC1O60832 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)15.74■□□□□ 0.115e-6■□□□□ 9.1
DKC1O60832 ARIH2-223ENST00000484999 728 ntTSL 515.62■□□□□ 0.095e-6■□□□□ 9.1
DKC1O60832 SPG7-203ENST00000561702 2042 ntTSL 215.58■□□□□ 0.095e-6■□□□□ 9.1
DKC1O60832 ARIH2-213ENST00000466850 546 ntTSL 213.86□□□□□ -0.195e-6■□□□□ 9.1
DKC1O60832 SPG7-211ENST00000565370 686 ntTSL 313.85□□□□□ -0.195e-6■□□□□ 9.1
DKC1O60832 ARIH2-215ENST00000470296 457 ntTSL 1 (best)13.77□□□□□ -0.215e-6■□□□□ 9.1
DKC1O60832 SPG7-222ENST00000569820 2305 ntTSL 512.76□□□□□ -0.375e-6■□□□□ 9.1
DKC1O60832 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.395e-6■□□□□ 9.1
DKC1O60832 ARIH2-210ENST00000463204 522 ntTSL 511.89□□□□□ -0.515e-6■□□□□ 9.1
DKC1O60832 PSMD14-202ENST00000437630 577 ntTSL 511.88□□□□□ -0.515e-6■□□□□ 9.1
DKC1O60832 ARIH2-201ENST00000356401 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.585e-6■□□□□ 9.1
DKC1O60832 RFX3-207ENST00000449190 869 ntTSL 310.31□□□□□ -0.765e-6■□□□□ 9.1
DKC1O60832 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.45□□□□□ -0.95e-6■□□□□ 9.1
DKC1O60832 DPY19L3-209ENST00000592142 5968 ntTSL 1 (best)8.83□□□□□ -15e-6■□□□□ 9.1
DKC1O60832 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.045e-6■□□□□ 9.1
DKC1O60832 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.365e-6■□□□□ 9.1
DKC1O60832 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.385e-6■□□□□ 9.1
DKC1O60832 PPAN-203ENST00000430370 594 ntTSL 313.74□□□□□ -0.215e-71■□□□□ 9.1
DKC1O60832 SNORD105-201ENST00000386910 85 ntBASIC0.71□□□□□ -2.35e-71■□□□□ 9.1
DKC1O60832 TM9SF4-204ENST00000442842 563 ntTSL 415.18■□□□□ 0.023e-7■□□□□ 9
DKC1O60832 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC13.43□□□□□ -0.263e-7■□□□□ 9
DKC1O60832 TM9SF4-203ENST00000417389 553 ntTSL 412.42□□□□□ -0.423e-7■□□□□ 9
DKC1O60832 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.33e-7■□□□□ 9
DKC1O60832 TM9SF4-205ENST00000450829 550 ntTSL 46.35□□□□□ -1.393e-7■□□□□ 9
DKC1O60832 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.933e-6■□□□□ 9
DKC1O60832 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.012e-8■□□□□ 8.9
DKC1O60832 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.932e-8■□□□□ 8.9
DKC1O60832 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.492e-8■□□□□ 8.9
DKC1O60832 ACTG1-205ENST00000572105 1168 ntTSL 515.69■□□□□ 0.12e-8■□□□□ 8.9
DKC1O60832 ACTG1-215ENST00000576917 1958 ntTSL 514.96□□□□□ -0.012e-8■□□□□ 8.9
DKC1O60832 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.062e-8■□□□□ 8.9
DKC1O60832 ACTG1-213ENST00000576214 1024 ntTSL 514.1□□□□□ -0.152e-8■□□□□ 8.9
DKC1O60832 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.182e-8■□□□□ 8.9
DKC1O60832 ACTG1-214ENST00000576544 1720 ntTSL 513.83□□□□□ -0.22e-8■□□□□ 8.9
DKC1O60832 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)13.54□□□□□ -0.242e-8■□□□□ 8.9
DKC1O60832 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)13.48□□□□□ -0.252e-8■□□□□ 8.9
DKC1O60832 FN1-217ENST00000471193 496 ntTSL 313□□□□□ -0.332e-85■□□□□ 8.9
DKC1O60832 SNORD116-22-201ENST00000384430 92 ntBASIC-2.01□□□□□ -2.739e-25■□□□□ 8.9
DKC1O60832 A2M-211ENST00000543436 600 ntTSL 512.77□□□□□ -0.371e-32■□□□□ 8.9
DKC1O60832 LDB1-204ENST00000490751 762 ntTSL 235.18■■■■□ 3.221e-9■□□□□ 8.9
DKC1O60832 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.16■■■□□ 2.261e-9■□□□□ 8.9
DKC1O60832 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.511e-9■□□□□ 8.9
DKC1O60832 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.171e-9■□□□□ 8.9
DKC1O60832 SNORD116-12-201ENST00000384468 92 ntBASIC4.06□□□□□ -1.764e-13■□□□□ 8.9
DKC1O60832 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 58.22□□□□□ -1.097e-48■□□□□ 8.9
DKC1O60832 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.227e-48■□□□□ 8.9
DKC1O60832 RPL17-219ENST00000584364 523 ntTSL 24.72□□□□□ -1.657e-48■□□□□ 8.9
DKC1O60832 RPL17-214ENST00000582588 401 ntTSL 23.06□□□□□ -1.927e-48■□□□□ 8.9
DKC1O60832 SNORD58C-201ENST00000365223 64 ntBASIC-0.93□□□□□ -2.567e-48■□□□□ 8.9
DKC1O60832 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.161e-8■□□□□ 8.9
DKC1O60832 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.02□□□□□ -0.013e-13■□□□□ 8.8
DKC1O60832 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.43□□□□□ -0.13e-13■□□□□ 8.8
DKC1O60832 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.13e-13■□□□□ 8.8
DKC1O60832 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.113e-13■□□□□ 8.8
DKC1O60832 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.53e-13■□□□□ 8.8
DKC1O60832 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC11.04□□□□□ -0.643e-13■□□□□ 8.8
DKC1O60832 FN1-226ENST00000496542 695 ntTSL 214.5□□□□□ -0.091e-323■□□□□ 8.8
DKC1O60832 SNHG1-225ENST00000545920 625 ntTSL 26.89□□□□□ -1.311e-323■□□□□ 8.7
DKC1O60832 GSN-207ENST00000432226 1042 ntTSL 519.39■□□□□ 0.693e-26■□□□□ 8.7
DKC1O60832 GSN-213ENST00000483960 802 ntTSL 312.73□□□□□ -0.373e-26■□□□□ 8.7
DKC1O60832 GSN-214ENST00000485767 6454 ntTSL 1 (best)11.57□□□□□ -0.563e-26■□□□□ 8.7
DKC1O60832 FN1-221ENST00000480737 384 ntTSL 22.82□□□□□ -1.961e-46■□□□□ 8.7
DKC1O60832 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.068e-32■□□□□ 8.7
DKC1O60832 A2M-212ENST00000545828 471 ntTSL 45.4□□□□□ -1.548e-32■□□□□ 8.7
DKC1O60832 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.497e-7■□□□□ 8.6
DKC1O60832 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.987e-7■□□□□ 8.6
DKC1O60832 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.1■□□□□ 0.977e-7■□□□□ 8.6
DKC1O60832 PRKCA-203ENST00000578063 1733 ntTSL 1 (best)20.67■□□□□ 0.97e-7■□□□□ 8.6
Retrieved 100 of 8,567 protein–RNA pairs in 83 ms