Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CASQ1P31415 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CASQ1P31415 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CASQ1P31415 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.84■□□□□ 0.93
CASQ1P31415 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CASQ1P31415 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CASQ1P31415 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.84■□□□□ 0.93
CASQ1P31415 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CASQ1P31415 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 PHGDH-210ENST00000641115 1638 ntBASIC20.84■□□□□ 0.93
CASQ1P31415 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.84■□□□□ 0.93
CASQ1P31415 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CASQ1P31415 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CASQ1P31415 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CASQ1P31415 AL354751.1-201ENST00000412768 1863 ntBASIC20.84■□□□□ 0.93
CASQ1P31415 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.83■□□□□ 0.93
CASQ1P31415 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CASQ1P31415 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.83■□□□□ 0.93
CASQ1P31415 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
CASQ1P31415 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.83■□□□□ 0.93
CASQ1P31415 Z98044.1-201ENST00000632503 1764 ntBASIC20.83■□□□□ 0.93
CASQ1P31415 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CASQ1P31415 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.83■□□□□ 0.93
CASQ1P31415 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.83■□□□□ 0.93
CASQ1P31415 EDA-201ENST00000338901 1233 ntBASIC20.83■□□□□ 0.93
CASQ1P31415 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CASQ1P31415 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CASQ1P31415 SLC7A5P1-201ENST00000568957 537 ntBASIC20.83■□□□□ 0.93
CASQ1P31415 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CASQ1P31415 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CASQ1P31415 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.83■□□□□ 0.92
CASQ1P31415 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CASQ1P31415 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CASQ1P31415 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CASQ1P31415 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.83■□□□□ 0.92
CASQ1P31415 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.83■□□□□ 0.92
CASQ1P31415 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CASQ1P31415 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
CASQ1P31415 NOC2LP2-201ENST00000407594 1944 ntBASIC20.82■□□□□ 0.92
CASQ1P31415 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CASQ1P31415 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.82■□□□□ 0.92
CASQ1P31415 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CASQ1P31415 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.82■□□□□ 0.92
CASQ1P31415 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CASQ1P31415 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 MIR939-201ENST00000401314 82 ntBASIC20.82■□□□□ 0.92
CASQ1P31415 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.82■□□□□ 0.92
CASQ1P31415 AC091305.1-201ENST00000479476 895 ntBASIC20.82■□□□□ 0.92
CASQ1P31415 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CASQ1P31415 AF213884.3-201ENST00000563833 479 ntBASIC20.82■□□□□ 0.92
CASQ1P31415 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.82■□□□□ 0.92
CASQ1P31415 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.82■□□□□ 0.92
CASQ1P31415 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASQ1P31415 CYP21A1P-202ENST00000354927 1481 ntBASIC20.81■□□□□ 0.92
CASQ1P31415 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.81■□□□□ 0.92
CASQ1P31415 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.81■□□□□ 0.92
CASQ1P31415 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CASQ1P31415 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.81■□□□□ 0.92
CASQ1P31415 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.81■□□□□ 0.92
CASQ1P31415 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.81■□□□□ 0.92
CASQ1P31415 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.81■□□□□ 0.92
CASQ1P31415 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.81■□□□□ 0.92
CASQ1P31415 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.81■□□□□ 0.92
CASQ1P31415 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASQ1P31415 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.81■□□□□ 0.92
CASQ1P31415 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms