RNA–Protein interactions for RNA: ENST00000329966.10

USP45-202, Transcript of ubiquitin specific peptidase 45, humanhuman

TSL 1 (best) BASIC

Gene USP45, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP45-202ENST00000329966 NISCHQ9Y2I1 1504 aa51.14■■■■■ 5.78
USP45-202ENST00000329966 CCDC180Q9P1Z9 1646 aa45.29■■■■■ 4.84
USP45-202ENST00000329966 ABCC9O60706 1549 aa44.4■■■■■ 4.7
USP45-202ENST00000329966 DCAF8L2P0C7V8 631 aa42.75■■■■■ 4.43
USP45-202ENST00000329966 ZCCHC6Q5VYS8 1495 aaKnown RBP42.62■■■■■ 4.41
USP45-202ENST00000329966 RB1CC1Q8TDY2 1594 aa42.61■■■■■ 4.41
USP45-202ENST00000329966 NACADO15069 1562 aa42.59■■■■■ 4.41
USP45-202ENST00000329966 MYO15BQ96JP2 1530 aa42.34■■■■■ 4.37
USP45-202ENST00000329966 DCAF1Q9Y4B6 1507 aa42.24■■■■■ 4.35
USP45-202ENST00000329966 UNC13AQ9UPW8 1703 aa41.7■■■■■ 4.27
USP45-202ENST00000329966 PABPN1Q86U42 306 aaKnown RBP eCLIP41.57■■■■■ 4.25
USP45-202ENST00000329966 SCRIBQ14160 1630 aa41.47■■■■■ 4.23
USP45-202ENST00000329966 BICRAQ9NZM4 1560 aa41.45■■■■■ 4.23
USP45-202ENST00000329966 SHROOM4Q9ULL8 1493 aa40.82■■■■■ 4.13
USP45-202ENST00000329966 DNAJC5BQ9UF47 199 aa40.77■■■■■ 4.12
USP45-202ENST00000329966 EIF4G1Q04637 1599 aaKnown RBP40.29■■■■■ 4.04
USP45-202ENST00000329966 CC2D2AQ9P2K1 1620 aa40.11■■■■■ 4.01
USP45-202ENST00000329966 CECR2Q9BXF3 1484 aa39.92■■■■□ 3.98
USP45-202ENST00000329966 SMARCA4P51532 1647 aa39.64■■■■□ 3.94
USP45-202ENST00000329966 BAZ1AQ9NRL2 1556 aaPredicted RBP39.56■■■■□ 3.92
USP45-202ENST00000329966 MROH2BQ7Z745 1585 aa39.47■■■■□ 3.91
USP45-202ENST00000329966 ATAD2BQ9ULI0 1458 aa39.43■■■■□ 3.9
USP45-202ENST00000329966 NCAPD3P42695 1498 aa39.36■■■■□ 3.89
USP45-202ENST00000329966 SMARCA2P51531 1590 aa39.29■■■■□ 3.88
USP45-202ENST00000329966 PEG3Q9GZU2 1588 aa39.21■■■■□ 3.87
USP45-202ENST00000329966 HMGXB3Q12766 1538 aa39.13■■■■□ 3.85
USP45-202ENST00000329966 BAZ1BQ9UIG0 1483 aaKnown RBP39.07■■■■□ 3.84
USP45-202ENST00000329966 RSF1Q96T23 1441 aaPredicted RBP39.05■■■■□ 3.84
USP45-202ENST00000329966 WIZO95785 1651 aa39.03■■■■□ 3.84
USP45-202ENST00000329966 TOP2AP11388 1531 aaKnown RBP38.56■■■■□ 3.76
USP45-202ENST00000329966 NESP48681 1621 aa38.49■■■■□ 3.75
USP45-202ENST00000329966 LAMC3Q9Y6N6 1575 aa38.24■■■■□ 3.71
USP45-202ENST00000329966 CADPSQ9ULU8 1353 aa38.23■■■■□ 3.71
USP45-202ENST00000329966 SUPT5HO00267 1087 aaKnown RBP38.19■■■■□ 3.7
USP45-202ENST00000329966 CCDC88BA6NC98 1476 aa38.18■■■■□ 3.7
USP45-202ENST00000329966 ERCC6Q03468 1493 aa38.18■■■■□ 3.7
USP45-202ENST00000329966 CFTRP13569 1480 aa38.03■■■■□ 3.68
USP45-202ENST00000329966 PDS5BQ9NTI5 1447 aa37.99■■■■□ 3.67
USP45-202ENST00000329966 KIF21AQ7Z4S6 1674 aa37.94■■■■□ 3.66
USP45-202ENST00000329966 FANCD2Q9BXW9 1451 aa37.8■■■■□ 3.64
USP45-202ENST00000329966 THOC2Q8NI27 1593 aaKnown RBP37.79■■■■□ 3.64
USP45-202ENST00000329966 CEP164Q9UPV0 1460 aa37.7■■■■□ 3.63
USP45-202ENST00000329966 CUX2O14529 1486 aa37.69■■■■□ 3.62
USP45-202ENST00000329966 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
USP45-202ENST00000329966 PRDM2Q13029 1718 aa37.62■■■■□ 3.61
USP45-202ENST00000329966 WDR62O43379 1518 aa37.51■■■■□ 3.59
USP45-202ENST00000329966 URB2Q14146 1524 aaKnown RBP37.46■■■■□ 3.59
USP45-202ENST00000329966 TOPBP1Q92547 1522 aa37.21■■■■□ 3.55
USP45-202ENST00000329966 DNMBPQ6XZF7 1577 aa37.14■■■■□ 3.54
USP45-202ENST00000329966 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
USP45-202ENST00000329966 CUX1P39880 1505 aa37.01■■■■□ 3.51
USP45-202ENST00000329966 POLA1P09884 1462 aaPredicted RBP36.92■■■■□ 3.5
USP45-202ENST00000329966 IFT140Q96RY7 1462 aa36.91■■■■□ 3.5
USP45-202ENST00000329966 ZNF608Q9ULD9 1512 aaPredicted RBP36.85■■■■□ 3.49
USP45-202ENST00000329966 FGD5Q6ZNL6 1462 aa36.84■■■■□ 3.49
USP45-202ENST00000329966 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
USP45-202ENST00000329966 TARBP1Q13395 1621 aaKnown RBP36.8■■■■□ 3.48
USP45-202ENST00000329966 WRNQ14191 1432 aaPredicted RBP eCLIP36.76■■■■□ 3.48
USP45-202ENST00000329966 SOGA1O94964 1423 aa36.75■■■■□ 3.47
USP45-202ENST00000329966 SYNJ1O43426 1573 aa36.72■■■■□ 3.47
USP45-202ENST00000329966 TOP2BQ02880 1626 aa36.65■■■■□ 3.46
USP45-202ENST00000329966 AQRO60306 1485 aaKnown RBP eCLIP36.64■■■■□ 3.46
USP45-202ENST00000329966 BIVM-ERCC5R4GMW8 1640 aa36.62■■■■□ 3.45
USP45-202ENST00000329966 EIF4G3O43432 1585 aaKnown RBP36.61■■■■□ 3.45
USP45-202ENST00000329966 TDRD9Q8NDG6 1382 aaKnown RBP36.6■■■■□ 3.45
USP45-202ENST00000329966 DNAJC5Q9H3Z4 198 aa36.51■■■■□ 3.44
USP45-202ENST00000329966 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
USP45-202ENST00000329966 ABCA10Q8WWZ4 1543 aa36.45■■■■□ 3.43
USP45-202ENST00000329966 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
USP45-202ENST00000329966 ABCA5Q8WWZ7 1642 aa36.29■■■■□ 3.4
USP45-202ENST00000329966 GRIN2BQ13224 1484 aa36.28■■■■□ 3.4
USP45-202ENST00000329966 SNAPC4Q5SXM2 1469 aa36.26■■■■□ 3.39
USP45-202ENST00000329966 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
USP45-202ENST00000329966 PBRM1Q86U86 1689 aa36.19■■■■□ 3.38
USP45-202ENST00000329966 FBLN2P98095 1184 aa36.15■■■■□ 3.38
USP45-202ENST00000329966 MAGI1Q96QZ7 1491 aaPredicted RBP36.14■■■■□ 3.38
USP45-202ENST00000329966 CHD1O14646 1710 aa36.12■■■■□ 3.37
USP45-202ENST00000329966 SYNJ2O15056 1496 aa36.03■■■■□ 3.36
USP45-202ENST00000329966 CHMP7Q8WUX9 453 aaPredicted RBP36.03■■■■□ 3.36
USP45-202ENST00000329966 ERICH3Q5RHP9 1530 aa35.98■■■■□ 3.35
USP45-202ENST00000329966 TRIM41Q8WV44 630 aa35.98■■■■□ 3.35
USP45-202ENST00000329966 KIF27Q86VH2 1401 aa35.95■■■■□ 3.35
USP45-202ENST00000329966 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
USP45-202ENST00000329966 FHAD1B1AJZ9 1412 aa35.89■■■■□ 3.34
USP45-202ENST00000329966 IGF1RP08069 1367 aa35.88■■■■□ 3.33
USP45-202ENST00000329966 GRIN2AQ12879 1464 aa35.83■■■■□ 3.33
USP45-202ENST00000329966 RUSC2Q8N2Y8 1516 aa35.82■■■■□ 3.33
USP45-202ENST00000329966 CLASP1Q7Z460 1538 aa35.76■■■■□ 3.31
USP45-202ENST00000329966 CHIC1Q5VXU3 224 aa35.7■■■■□ 3.31
USP45-202ENST00000329966 NUP160Q12769 1436 aa35.68■■■■□ 3.3
USP45-202ENST00000329966 CEP170Q5SW79 1584 aa35.68■■■■□ 3.3
USP45-202ENST00000329966 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
USP45-202ENST00000329966 CARMIL1Q5VZK9 1371 aa35.63■■■■□ 3.29
USP45-202ENST00000329966 CUL7Q14999 1698 aa35.63■■■■□ 3.29
USP45-202ENST00000329966 RIMBP3CA6NJZ7 1639 aa35.62■■■■□ 3.29
USP45-202ENST00000329966 RIMBP3BA6NNM3 1639 aa35.62■■■■□ 3.29
USP45-202ENST00000329966 RIMBP3Q9UFD9 1639 aa35.62■■■■□ 3.29
USP45-202ENST00000329966 ARAP1Q96P48 1450 aa35.4■■■■□ 3.26
USP45-202ENST00000329966 RAPGEF2Q9Y4G8 1499 aa35.4■■■■□ 3.26
USP45-202ENST00000329966 ERCC6L2Q5T890 1561 aa35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms