RNA–Protein interactions for RNA: ENST00000316124.3

AP003774.1-201, humanhuman

TSL 2 BASIC

Gene AP003774.1, Length 2,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003774.1-201ENST00000316124 NISCHQ9Y2I1 1504 aa39.62■■■■□ 3.93
AP003774.1-201ENST00000316124 CCDC180Q9P1Z9 1646 aa33.95■■■■□ 3.03
AP003774.1-201ENST00000316124 ZCCHC6Q5VYS8 1495 aaKnown RBP33.44■■■□□ 2.94
AP003774.1-201ENST00000316124 SHROOM4Q9ULL8 1493 aa33.4■■■□□ 2.94
AP003774.1-201ENST00000316124 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
AP003774.1-201ENST00000316124 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
AP003774.1-201ENST00000316124 DCAF1Q9Y4B6 1507 aa32.55■■■□□ 2.8
AP003774.1-201ENST00000316124 MYO15BQ96JP2 1530 aa31.75■■■□□ 2.67
AP003774.1-201ENST00000316124 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
AP003774.1-201ENST00000316124 ABCC9O60706 1549 aa31.68■■■□□ 2.66
AP003774.1-201ENST00000316124 CHIC1Q5VXU3 224 aa31.49■■■□□ 2.63
AP003774.1-201ENST00000316124 NACADO15069 1562 aa31.44■■■□□ 2.62
AP003774.1-201ENST00000316124 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
AP003774.1-201ENST00000316124 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.56
AP003774.1-201ENST00000316124 CECR2Q9BXF3 1484 aa30.9■■■□□ 2.54
AP003774.1-201ENST00000316124 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
AP003774.1-201ENST00000316124 WIZO95785 1651 aa30.61■■■□□ 2.49
AP003774.1-201ENST00000316124 UNC13AQ9UPW8 1703 aa30.6■■■□□ 2.49
AP003774.1-201ENST00000316124 LOC105371045A0A1W2PR82 267 aa30.51■■■□□ 2.48
AP003774.1-201ENST00000316124 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
AP003774.1-201ENST00000316124 TRIM41Q8WV44 630 aa30.38■■■□□ 2.45
AP003774.1-201ENST00000316124 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
AP003774.1-201ENST00000316124 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
AP003774.1-201ENST00000316124 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
AP003774.1-201ENST00000316124 TOP2AP11388 1531 aaKnown RBP30.13■■■□□ 2.41
AP003774.1-201ENST00000316124 FAM9AQ8IZU1 332 aaPredicted RBP30.08■■■□□ 2.41
AP003774.1-201ENST00000316124 PCGF6Q9BYE7 350 aa30.06■■■□□ 2.4
AP003774.1-201ENST00000316124 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
AP003774.1-201ENST00000316124 CCDC88BA6NC98 1476 aa29.96■■■□□ 2.39
AP003774.1-201ENST00000316124 SMARCA2P51531 1590 aa29.95■■■□□ 2.39
AP003774.1-201ENST00000316124 EHMT2Q96KQ7 1210 aa29.81■■■□□ 2.36
AP003774.1-201ENST00000316124 HRCP23327 699 aa29.79■■■□□ 2.36
AP003774.1-201ENST00000316124 ABCC8Q09428 1581 aa29.76■■■□□ 2.35
AP003774.1-201ENST00000316124 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
AP003774.1-201ENST00000316124 TRIM26Q12899 539 aaPredicted RBP29.62■■■□□ 2.33
AP003774.1-201ENST00000316124 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
AP003774.1-201ENST00000316124 BAZ1BQ9UIG0 1483 aaKnown RBP29.47■■■□□ 2.31
AP003774.1-201ENST00000316124 SOGA1O94964 1423 aa29.37■■■□□ 2.29
AP003774.1-201ENST00000316124 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
AP003774.1-201ENST00000316124 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
AP003774.1-201ENST00000316124 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
AP003774.1-201ENST00000316124 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
AP003774.1-201ENST00000316124 EEA1Q15075 1411 aa29.18■■■□□ 2.26
AP003774.1-201ENST00000316124 CSRNP3Q8WYN3 585 aa29.16■■■□□ 2.26
AP003774.1-201ENST00000316124 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
AP003774.1-201ENST00000316124 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
AP003774.1-201ENST00000316124 CEP162Q5TB80 1403 aa29.05■■■□□ 2.24
AP003774.1-201ENST00000316124 TNIKQ9UKE5 1360 aa29.04■■■□□ 2.24
AP003774.1-201ENST00000316124 UBTFP17480 764 aaKnown RBP28.99■■■□□ 2.23
AP003774.1-201ENST00000316124 GOLGA3Q08378 1498 aa28.96■■■□□ 2.23
AP003774.1-201ENST00000316124 TOP2BQ02880 1626 aa28.89■■■□□ 2.22
AP003774.1-201ENST00000316124 CEP164Q9UPV0 1460 aa28.84■■■□□ 2.21
AP003774.1-201ENST00000316124 KIF21BO75037 1637 aa28.84■■■□□ 2.21
AP003774.1-201ENST00000316124 BIVM-ERCC5R4GMW8 1640 aa28.82■■■□□ 2.2
AP003774.1-201ENST00000316124 ZEB1P37275 1124 aaPredicted RBP28.78■■■□□ 2.2
AP003774.1-201ENST00000316124 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
AP003774.1-201ENST00000316124 CFTRP13569 1480 aa28.72■■■□□ 2.19
AP003774.1-201ENST00000316124 RAPGEF2Q9Y4G8 1499 aa28.68■■■□□ 2.18
AP003774.1-201ENST00000316124 CUX1P39880 1505 aa28.68■■■□□ 2.18
AP003774.1-201ENST00000316124 CLIP1P30622 1438 aa28.6■■■□□ 2.17
AP003774.1-201ENST00000316124 PRDM2Q13029 1718 aa28.58■■■□□ 2.17
AP003774.1-201ENST00000316124 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
AP003774.1-201ENST00000316124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.51■■■□□ 2.15
AP003774.1-201ENST00000316124 RANGAP1P46060 587 aaPredicted RBP28.49■■■□□ 2.15
AP003774.1-201ENST00000316124 CADPSQ9ULU8 1353 aa28.47■■■□□ 2.15
AP003774.1-201ENST00000316124 PRXQ9BXM0 1461 aa28.46■■■□□ 2.15
AP003774.1-201ENST00000316124 ERICH3Q5RHP9 1530 aa28.44■■■□□ 2.14
AP003774.1-201ENST00000316124 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
AP003774.1-201ENST00000316124 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
AP003774.1-201ENST00000316124 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
AP003774.1-201ENST00000316124 APLP2Q06481 763 aa28.25■■■□□ 2.11
AP003774.1-201ENST00000316124 CUX2O14529 1486 aa28.24■■■□□ 2.11
AP003774.1-201ENST00000316124 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
AP003774.1-201ENST00000316124 ARAP1Q96P48 1450 aa28.2■■■□□ 2.11
AP003774.1-201ENST00000316124 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.1
AP003774.1-201ENST00000316124 IGF1RP08069 1367 aa28.15■■■□□ 2.1
AP003774.1-201ENST00000316124 NESP48681 1621 aa28.13■■■□□ 2.09
AP003774.1-201ENST00000316124 HNRNPUL2Q1KMD3 747 aaKnown RBP28.1■■■□□ 2.09
AP003774.1-201ENST00000316124 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
AP003774.1-201ENST00000316124 ARHGAP35Q9NRY4 1499 aa28.03■■■□□ 2.08
AP003774.1-201ENST00000316124 CARMIL1Q5VZK9 1371 aa28.02■■■□□ 2.08
AP003774.1-201ENST00000316124 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
AP003774.1-201ENST00000316124 RAD54L2Q9Y4B4 1467 aa27.98■■■□□ 2.07
AP003774.1-201ENST00000316124 KANK4Q5T7N3 995 aaPredicted RBP27.96■■■□□ 2.07
AP003774.1-201ENST00000316124 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
AP003774.1-201ENST00000316124 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
AP003774.1-201ENST00000316124 ABCA10Q8WWZ4 1543 aa27.89■■■□□ 2.06
AP003774.1-201ENST00000316124 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.05
AP003774.1-201ENST00000316124 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.04
AP003774.1-201ENST00000316124 WDR97A6NE52 1622 aa27.73■■■□□ 2.03
AP003774.1-201ENST00000316124 PDS5BQ9NTI5 1447 aa27.72■■■□□ 2.03
AP003774.1-201ENST00000316124 CUL7Q14999 1698 aa27.71■■■□□ 2.03
AP003774.1-201ENST00000316124 RRBP1Q9P2E9 1410 aaKnown RBP27.71■■■□□ 2.03
AP003774.1-201ENST00000316124 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.02
AP003774.1-201ENST00000316124 P3H3Q8IVL6 736 aa27.69■■■□□ 2.02
AP003774.1-201ENST00000316124 TIAM1Q13009 1591 aa27.67■■■□□ 2.02
AP003774.1-201ENST00000316124 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.01
AP003774.1-201ENST00000316124 CTTNBP2Q8WZ74 1663 aa27.62■■■□□ 2.01
AP003774.1-201ENST00000316124 MAP3K1Q13233 1512 aa27.61■■■□□ 2.01
AP003774.1-201ENST00000316124 CCNB3Q8WWL7 1395 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms