RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 NISCHQ9Y2I1 1504 aa46.87■■■■■ 5.09
ATPAF2-206ENST00000474627 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
ATPAF2-206ENST00000474627 ABCC9O60706 1549 aa40.69■■■■■ 4.1
ATPAF2-206ENST00000474627 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
ATPAF2-206ENST00000474627 RB1CC1Q8TDY2 1594 aa39.11■■■■□ 3.85
ATPAF2-206ENST00000474627 NACADO15069 1562 aa39.08■■■■□ 3.85
ATPAF2-206ENST00000474627 ZCCHC6Q5VYS8 1495 aaKnown RBP39.05■■■■□ 3.84
ATPAF2-206ENST00000474627 MYO15BQ96JP2 1530 aa38.86■■■■□ 3.81
ATPAF2-206ENST00000474627 DCAF1Q9Y4B6 1507 aa38.73■■■■□ 3.79
ATPAF2-206ENST00000474627 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
ATPAF2-206ENST00000474627 PABPN1Q86U42 306 aaKnown RBP eCLIP38.1■■■■□ 3.69
ATPAF2-206ENST00000474627 SCRIBQ14160 1630 aa38.01■■■■□ 3.68
ATPAF2-206ENST00000474627 BICRAQ9NZM4 1560 aa37.93■■■■□ 3.66
ATPAF2-206ENST00000474627 SHROOM4Q9ULL8 1493 aa37.49■■■■□ 3.59
ATPAF2-206ENST00000474627 DNAJC5BQ9UF47 199 aa37.3■■■■□ 3.56
ATPAF2-206ENST00000474627 EIF4G1Q04637 1599 aaKnown RBP36.93■■■■□ 3.5
ATPAF2-206ENST00000474627 CC2D2AQ9P2K1 1620 aa36.76■■■■□ 3.48
ATPAF2-206ENST00000474627 CECR2Q9BXF3 1484 aa36.55■■■■□ 3.44
ATPAF2-206ENST00000474627 SMARCA4P51532 1647 aa36.33■■■■□ 3.41
ATPAF2-206ENST00000474627 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
ATPAF2-206ENST00000474627 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
ATPAF2-206ENST00000474627 ATAD2BQ9ULI0 1458 aa36.14■■■■□ 3.38
ATPAF2-206ENST00000474627 NCAPD3P42695 1498 aa36.09■■■■□ 3.37
ATPAF2-206ENST00000474627 SMARCA2P51531 1590 aa36.07■■■■□ 3.36
ATPAF2-206ENST00000474627 PEG3Q9GZU2 1588 aa35.94■■■■□ 3.34
ATPAF2-206ENST00000474627 HMGXB3Q12766 1538 aa35.88■■■■□ 3.34
ATPAF2-206ENST00000474627 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
ATPAF2-206ENST00000474627 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
ATPAF2-206ENST00000474627 WIZO95785 1651 aa35.75■■■■□ 3.31
ATPAF2-206ENST00000474627 TOP2AP11388 1531 aaKnown RBP35.36■■■■□ 3.25
ATPAF2-206ENST00000474627 NESP48681 1621 aa35.24■■■■□ 3.23
ATPAF2-206ENST00000474627 LAMC3Q9Y6N6 1575 aa35.09■■■■□ 3.21
ATPAF2-206ENST00000474627 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
ATPAF2-206ENST00000474627 ERCC6Q03468 1493 aa35.06■■■■□ 3.2
ATPAF2-206ENST00000474627 SUPT5HO00267 1087 aaKnown RBP35.04■■■■□ 3.2
ATPAF2-206ENST00000474627 CCDC88BA6NC98 1476 aa34.99■■■■□ 3.19
ATPAF2-206ENST00000474627 PDS5BQ9NTI5 1447 aa34.9■■■■□ 3.18
ATPAF2-206ENST00000474627 CFTRP13569 1480 aa34.87■■■■□ 3.17
ATPAF2-206ENST00000474627 KIF21AQ7Z4S6 1674 aa34.75■■■■□ 3.15
ATPAF2-206ENST00000474627 FANCD2Q9BXW9 1451 aa34.67■■■■□ 3.14
ATPAF2-206ENST00000474627 THOC2Q8NI27 1593 aaKnown RBP34.61■■■■□ 3.13
ATPAF2-206ENST00000474627 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
ATPAF2-206ENST00000474627 CUX2O14529 1486 aa34.6■■■■□ 3.13
ATPAF2-206ENST00000474627 MRC2Q9UBG0 1479 aa34.53■■■■□ 3.12
ATPAF2-206ENST00000474627 PRDM2Q13029 1718 aa34.5■■■■□ 3.11
ATPAF2-206ENST00000474627 WDR62O43379 1518 aa34.39■■■■□ 3.1
ATPAF2-206ENST00000474627 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
ATPAF2-206ENST00000474627 TOPBP1Q92547 1522 aa34.11■■■■□ 3.05
ATPAF2-206ENST00000474627 ABCC8Q09428 1581 aa34.09■■■■□ 3.05
ATPAF2-206ENST00000474627 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
ATPAF2-206ENST00000474627 CUX1P39880 1505 aa33.89■■■■□ 3.02
ATPAF2-206ENST00000474627 IFT140Q96RY7 1462 aa33.87■■■■□ 3.01
ATPAF2-206ENST00000474627 POLA1P09884 1462 aaPredicted RBP33.83■■■■□ 3.01
ATPAF2-206ENST00000474627 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
ATPAF2-206ENST00000474627 ZNF608Q9ULD9 1512 aaPredicted RBP33.74■■■□□ 2.99
ATPAF2-206ENST00000474627 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
ATPAF2-206ENST00000474627 SOGA1O94964 1423 aa33.73■■■□□ 2.99
ATPAF2-206ENST00000474627 RAD54L2Q9Y4B4 1467 aa33.72■■■□□ 2.99
ATPAF2-206ENST00000474627 TARBP1Q13395 1621 aaKnown RBP33.7■■■□□ 2.99
ATPAF2-206ENST00000474627 SYNJ1O43426 1573 aa33.62■■■□□ 2.97
ATPAF2-206ENST00000474627 TOP2BQ02880 1626 aa33.6■■■□□ 2.97
ATPAF2-206ENST00000474627 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.97
ATPAF2-206ENST00000474627 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.97
ATPAF2-206ENST00000474627 EIF4G3O43432 1585 aaKnown RBP33.56■■■□□ 2.96
ATPAF2-206ENST00000474627 TDRD9Q8NDG6 1382 aaKnown RBP33.55■■■□□ 2.96
ATPAF2-206ENST00000474627 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
ATPAF2-206ENST00000474627 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
ATPAF2-206ENST00000474627 WDR97A6NE52 1622 aa33.41■■■□□ 2.94
ATPAF2-206ENST00000474627 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
ATPAF2-206ENST00000474627 GRIN2BQ13224 1484 aa33.29■■■□□ 2.92
ATPAF2-206ENST00000474627 OSCARQ8IYS5 282 aa33.27■■■□□ 2.92
ATPAF2-206ENST00000474627 ABCA5Q8WWZ7 1642 aa33.26■■■□□ 2.91
ATPAF2-206ENST00000474627 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
ATPAF2-206ENST00000474627 FBLN2P98095 1184 aa33.21■■■□□ 2.91
ATPAF2-206ENST00000474627 PBRM1Q86U86 1689 aa33.18■■■□□ 2.9
ATPAF2-206ENST00000474627 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
ATPAF2-206ENST00000474627 CHMP7Q8WUX9 453 aaPredicted RBP33.11■■■□□ 2.89
ATPAF2-206ENST00000474627 CHD1O14646 1710 aa33.1■■■□□ 2.89
ATPAF2-206ENST00000474627 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
ATPAF2-206ENST00000474627 SYNJ2O15056 1496 aa33.06■■■□□ 2.88
ATPAF2-206ENST00000474627 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
ATPAF2-206ENST00000474627 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
ATPAF2-206ENST00000474627 ADAMTS12P58397 1594 aa32.94■■■□□ 2.86
ATPAF2-206ENST00000474627 FHAD1B1AJZ9 1412 aa32.93■■■□□ 2.86
ATPAF2-206ENST00000474627 IGF1RP08069 1367 aa32.89■■■□□ 2.86
ATPAF2-206ENST00000474627 GRIN2AQ12879 1464 aa32.86■■■□□ 2.85
ATPAF2-206ENST00000474627 RUSC2Q8N2Y8 1516 aa32.78■■■□□ 2.84
ATPAF2-206ENST00000474627 CLASP1Q7Z460 1538 aa32.76■■■□□ 2.83
ATPAF2-206ENST00000474627 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
ATPAF2-206ENST00000474627 CUL7Q14999 1698 aa32.71■■■□□ 2.83
ATPAF2-206ENST00000474627 NUP160Q12769 1436 aa32.71■■■□□ 2.83
ATPAF2-206ENST00000474627 CARMIL1Q5VZK9 1371 aa32.71■■■□□ 2.83
ATPAF2-206ENST00000474627 CEP170Q5SW79 1584 aa32.68■■■□□ 2.82
ATPAF2-206ENST00000474627 ARHGEF11O15085 1522 aa32.67■■■□□ 2.82
ATPAF2-206ENST00000474627 RIMBP3CA6NJZ7 1639 aa32.65■■■□□ 2.82
ATPAF2-206ENST00000474627 RIMBP3BA6NNM3 1639 aa32.65■■■□□ 2.82
ATPAF2-206ENST00000474627 RIMBP3Q9UFD9 1639 aa32.65■■■□□ 2.82
ATPAF2-206ENST00000474627 RAPGEF2Q9Y4G8 1499 aa32.5■■■□□ 2.79
ATPAF2-206ENST00000474627 CYB5RLQ6IPT4 315 aa32.45■■■□□ 2.78
ATPAF2-206ENST00000474627 CSRNP3Q8WYN3 585 aa32.45■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms