Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 FZD10-202ENST00000539839 3282 ntBASIC20.4■□□□□ 0.86
CD248Q9HCU0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CD248Q9HCU0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
CD248Q9HCU0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD248Q9HCU0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CD248Q9HCU0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CD248Q9HCU0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD248Q9HCU0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.39■□□□□ 0.86
CD248Q9HCU0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CD248Q9HCU0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CD248Q9HCU0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD248Q9HCU0 AC211429.1-201ENST00000415277 523 ntBASIC20.39■□□□□ 0.85
CD248Q9HCU0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CD248Q9HCU0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.39■□□□□ 0.85
CD248Q9HCU0 RARRES2P10-201ENST00000564312 460 ntBASIC20.39■□□□□ 0.85
CD248Q9HCU0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.39■□□□□ 0.85
CD248Q9HCU0 AC113410.3-201ENST00000623366 203 ntBASIC20.39■□□□□ 0.85
CD248Q9HCU0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CD248Q9HCU0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD248Q9HCU0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD248Q9HCU0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD248Q9HCU0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.39■□□□□ 0.85
CD248Q9HCU0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.39■□□□□ 0.85
CD248Q9HCU0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 ECEL1P3-201ENST00000427961 737 ntBASIC20.38■□□□□ 0.85
CD248Q9HCU0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 AC023632.3-201ENST00000521633 145 ntBASIC20.38■□□□□ 0.85
CD248Q9HCU0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 BX088651.1-201ENST00000540551 451 ntBASIC20.38■□□□□ 0.85
CD248Q9HCU0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 REXO1L12P-201ENST00000622156 912 ntBASIC20.38■□□□□ 0.85
CD248Q9HCU0 MIR2861-201ENST00000636310 90 ntBASIC20.38■□□□□ 0.85
CD248Q9HCU0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 AL049796.1-201ENST00000565336 1766 ntBASIC20.38■□□□□ 0.85
CD248Q9HCU0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD248Q9HCU0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CD248Q9HCU0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 TSPY15P-201ENST00000457163 923 ntBASIC20.37■□□□□ 0.85
CD248Q9HCU0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.37■□□□□ 0.85
CD248Q9HCU0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD248Q9HCU0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms