RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
TNFRSF8-202ENST00000413146 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
TNFRSF8-202ENST00000413146 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
TNFRSF8-202ENST00000413146 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
TNFRSF8-202ENST00000413146 SUPT5HO00267 1087 aaKnown RBP32.74■■■□□ 2.83
TNFRSF8-202ENST00000413146 DCAF8L2P0C7V8 631 aa32.19■■■□□ 2.74
TNFRSF8-202ENST00000413146 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
TNFRSF8-202ENST00000413146 CHIC1Q5VXU3 224 aa31.93■■■□□ 2.7
TNFRSF8-202ENST00000413146 MYO15BQ96JP2 1530 aa31.87■■■□□ 2.69
TNFRSF8-202ENST00000413146 ABCC9O60706 1549 aa31.28■■■□□ 2.6
TNFRSF8-202ENST00000413146 HRCP23327 699 aa31.28■■■□□ 2.6
TNFRSF8-202ENST00000413146 PCGF6Q9BYE7 350 aa31.11■■■□□ 2.57
TNFRSF8-202ENST00000413146 SCRIBQ14160 1630 aa31.08■■■□□ 2.57
TNFRSF8-202ENST00000413146 LOC105371045A0A1W2PR82 267 aa30.94■■■□□ 2.54
TNFRSF8-202ENST00000413146 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
TNFRSF8-202ENST00000413146 NACADO15069 1562 aa30.87■■■□□ 2.53
TNFRSF8-202ENST00000413146 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
TNFRSF8-202ENST00000413146 TRIM26Q12899 539 aaPredicted RBP30.55■■■□□ 2.48
TNFRSF8-202ENST00000413146 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
TNFRSF8-202ENST00000413146 PPARGC1BQ86YN6 1023 aaKnown RBP30.51■■■□□ 2.47
TNFRSF8-202ENST00000413146 CECR2Q9BXF3 1484 aa30.37■■■□□ 2.45
TNFRSF8-202ENST00000413146 MROH2BQ7Z745 1585 aa30.33■■■□□ 2.45
TNFRSF8-202ENST00000413146 FAM9AQ8IZU1 332 aaPredicted RBP30.22■■■□□ 2.43
TNFRSF8-202ENST00000413146 WIZO95785 1651 aa30.21■■■□□ 2.43
TNFRSF8-202ENST00000413146 BAZ1AQ9NRL2 1556 aaPredicted RBP30.09■■■□□ 2.41
TNFRSF8-202ENST00000413146 UNC13AQ9UPW8 1703 aa30.02■■■□□ 2.4
TNFRSF8-202ENST00000413146 ZEB1P37275 1124 aaPredicted RBP30.01■■■□□ 2.39
TNFRSF8-202ENST00000413146 EHMT2Q96KQ7 1210 aa29.92■■■□□ 2.38
TNFRSF8-202ENST00000413146 EIF4G1Q04637 1599 aaKnown RBP29.91■■■□□ 2.38
TNFRSF8-202ENST00000413146 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
TNFRSF8-202ENST00000413146 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
TNFRSF8-202ENST00000413146 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
TNFRSF8-202ENST00000413146 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
TNFRSF8-202ENST00000413146 CCDC88BA6NC98 1476 aa29.58■■■□□ 2.33
TNFRSF8-202ENST00000413146 ABCC8Q09428 1581 aa29.57■■■□□ 2.32
TNFRSF8-202ENST00000413146 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
TNFRSF8-202ENST00000413146 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.29
TNFRSF8-202ENST00000413146 CEP162Q5TB80 1403 aa29.3■■■□□ 2.28
TNFRSF8-202ENST00000413146 SOGA1O94964 1423 aa29.29■■■□□ 2.28
TNFRSF8-202ENST00000413146 EEA1Q15075 1411 aa29.29■■■□□ 2.28
TNFRSF8-202ENST00000413146 TNIKQ9UKE5 1360 aa29.24■■■□□ 2.27
TNFRSF8-202ENST00000413146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.23■■■□□ 2.27
TNFRSF8-202ENST00000413146 CCER1Q8TC90 406 aaPredicted RBP29.22■■■□□ 2.27
TNFRSF8-202ENST00000413146 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
TNFRSF8-202ENST00000413146 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
TNFRSF8-202ENST00000413146 RUSC2Q8N2Y8 1516 aa29.12■■■□□ 2.25
TNFRSF8-202ENST00000413146 GOLGA3Q08378 1498 aa29.08■■■□□ 2.25
TNFRSF8-202ENST00000413146 UBTFP17480 764 aaKnown RBP29.05■■■□□ 2.24
TNFRSF8-202ENST00000413146 TTBK1Q5TCY1 1321 aaPredicted RBP29.04■■■□□ 2.24
TNFRSF8-202ENST00000413146 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
TNFRSF8-202ENST00000413146 CEP164Q9UPV0 1460 aa28.9■■■□□ 2.22
TNFRSF8-202ENST00000413146 KIF21BO75037 1637 aa28.9■■■□□ 2.22
TNFRSF8-202ENST00000413146 SCAF1Q9H7N4 1312 aaKnown RBP28.88■■■□□ 2.21
TNFRSF8-202ENST00000413146 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
TNFRSF8-202ENST00000413146 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
TNFRSF8-202ENST00000413146 DIEXFQ68CQ4 756 aaKnown RBP28.73■■■□□ 2.19
TNFRSF8-202ENST00000413146 CLIP1P30622 1438 aa28.71■■■□□ 2.19
TNFRSF8-202ENST00000413146 VPS8Q8N3P4 1428 aa28.63■■■□□ 2.17
TNFRSF8-202ENST00000413146 PELP1Q8IZL8 1130 aaKnown RBP28.61■■■□□ 2.17
TNFRSF8-202ENST00000413146 ACIN1Q9UKV3 1341 aaKnown RBP28.61■■■□□ 2.17
TNFRSF8-202ENST00000413146 TOP2BQ02880 1626 aa28.6■■■□□ 2.17
TNFRSF8-202ENST00000413146 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
TNFRSF8-202ENST00000413146 BIVM-ERCC5R4GMW8 1640 aa28.52■■■□□ 2.16
TNFRSF8-202ENST00000413146 NEUROD1Q13562 356 aa28.51■■■□□ 2.15
TNFRSF8-202ENST00000413146 APLP2Q06481 763 aa28.5■■■□□ 2.15
TNFRSF8-202ENST00000413146 CENPBP07199 599 aaPredicted RBP28.5■■■□□ 2.15
TNFRSF8-202ENST00000413146 ZNF316A6NFI3 1004 aaPredicted RBP28.49■■■□□ 2.15
TNFRSF8-202ENST00000413146 HNRNPUL2Q1KMD3 747 aaKnown RBP28.48■■■□□ 2.15
TNFRSF8-202ENST00000413146 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
TNFRSF8-202ENST00000413146 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
TNFRSF8-202ENST00000413146 ERICH3Q5RHP9 1530 aa28.4■■■□□ 2.14
TNFRSF8-202ENST00000413146 RANGAP1P46060 587 aaPredicted RBP28.37■■■□□ 2.13
TNFRSF8-202ENST00000413146 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
TNFRSF8-202ENST00000413146 PRXQ9BXM0 1461 aa28.32■■■□□ 2.12
TNFRSF8-202ENST00000413146 GTF3C3Q9Y5Q9 886 aa28.26■■■□□ 2.11
TNFRSF8-202ENST00000413146 CUX1P39880 1505 aa28.24■■■□□ 2.11
TNFRSF8-202ENST00000413146 ARAP1Q96P48 1450 aa28.23■■■□□ 2.11
TNFRSF8-202ENST00000413146 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
TNFRSF8-202ENST00000413146 CFTRP13569 1480 aa28.11■■■□□ 2.09
TNFRSF8-202ENST00000413146 CLSPNQ9HAW4 1339 aa28.07■■■□□ 2.08
TNFRSF8-202ENST00000413146 MIER1Q8N108 512 aa28.05■■■□□ 2.08
TNFRSF8-202ENST00000413146 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
TNFRSF8-202ENST00000413146 YTHDC1Q96MU7 727 aaKnown RBP28.03■■■□□ 2.08
TNFRSF8-202ENST00000413146 KANK4Q5T7N3 995 aaPredicted RBP28.02■■■□□ 2.08
TNFRSF8-202ENST00000413146 DHX57Q6P158 1386 aaKnown RBP28.01■■■□□ 2.07
TNFRSF8-202ENST00000413146 RRBP1Q9P2E9 1410 aaKnown RBP27.98■■■□□ 2.07
TNFRSF8-202ENST00000413146 ARHGAP35Q9NRY4 1499 aa27.95■■■□□ 2.06
TNFRSF8-202ENST00000413146 CUX2O14529 1486 aa27.85■■■□□ 2.05
TNFRSF8-202ENST00000413146 CCNB3Q8WWL7 1395 aa27.85■■■□□ 2.05
TNFRSF8-202ENST00000413146 IGF1RP08069 1367 aa27.78■■■□□ 2.04
TNFRSF8-202ENST00000413146 CADPSQ9ULU8 1353 aa27.74■■■□□ 2.03
TNFRSF8-202ENST00000413146 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
TNFRSF8-202ENST00000413146 MAP3K1Q13233 1512 aa27.72■■■□□ 2.03
TNFRSF8-202ENST00000413146 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
TNFRSF8-202ENST00000413146 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.02
TNFRSF8-202ENST00000413146 ITGAEP38570 1179 aa27.66■■■□□ 2.02
TNFRSF8-202ENST00000413146 RAB3GAP2Q9H2M9 1393 aa27.6■■■□□ 2.01
TNFRSF8-202ENST00000413146 LRRC9Q6ZRR7 1453 aa27.59■■■□□ 2.01
TNFRSF8-202ENST00000413146 FHAD1B1AJZ9 1412 aa27.57■■■□□ 2
TNFRSF8-202ENST00000413146 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms