RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 NISCHQ9Y2I1 1504 aa48.48■■■■■ 5.35
GCFC2-207ENST00000470503 ABCC9O60706 1549 aa43.52■■■■■ 4.56
GCFC2-207ENST00000470503 CCDC180Q9P1Z9 1646 aa43.5■■■■■ 4.55
GCFC2-207ENST00000470503 RB1CC1Q8TDY2 1594 aa41.48■■■■■ 4.23
GCFC2-207ENST00000470503 NACADO15069 1562 aa41.23■■■■■ 4.19
GCFC2-207ENST00000470503 DCAF8L2P0C7V8 631 aa40.95■■■■■ 4.15
GCFC2-207ENST00000470503 DNAJC5BQ9UF47 199 aa40.9■■■■■ 4.14
GCFC2-207ENST00000470503 MYO15BQ96JP2 1530 aa40.73■■■■■ 4.11
GCFC2-207ENST00000470503 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.08
GCFC2-207ENST00000470503 UNC13AQ9UPW8 1703 aa40.29■■■■■ 4.04
GCFC2-207ENST00000470503 BICRAQ9NZM4 1560 aa40.18■■■■■ 4.02
GCFC2-207ENST00000470503 ZCCHC6Q5VYS8 1495 aaKnown RBP40.15■■■■■ 4.02
GCFC2-207ENST00000470503 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
GCFC2-207ENST00000470503 SHROOM4Q9ULL8 1493 aa39.87■■■■□ 3.97
GCFC2-207ENST00000470503 SCRIBQ14160 1630 aa39.51■■■■□ 3.92
GCFC2-207ENST00000470503 CC2D2AQ9P2K1 1620 aa39.3■■■■□ 3.88
GCFC2-207ENST00000470503 CECR2Q9BXF3 1484 aa39.28■■■■□ 3.88
GCFC2-207ENST00000470503 EIF4G1Q04637 1599 aaKnown RBP39.24■■■■□ 3.87
GCFC2-207ENST00000470503 NCAPD3P42695 1498 aa38.1■■■■□ 3.69
GCFC2-207ENST00000470503 ATAD2BQ9ULI0 1458 aa37.9■■■■□ 3.66
GCFC2-207ENST00000470503 SMARCA2P51531 1590 aa37.82■■■■□ 3.65
GCFC2-207ENST00000470503 SMARCA4P51532 1647 aa37.77■■■■□ 3.64
GCFC2-207ENST00000470503 DNAJC5Q9H3Z4 198 aa37.75■■■■□ 3.63
GCFC2-207ENST00000470503 HMGXB3Q12766 1538 aa37.75■■■■□ 3.63
GCFC2-207ENST00000470503 CUX2O14529 1486 aa37.67■■■■□ 3.62
GCFC2-207ENST00000470503 BAZ1AQ9NRL2 1556 aaPredicted RBP37.66■■■■□ 3.62
GCFC2-207ENST00000470503 ERCC6Q03468 1493 aa37.65■■■■□ 3.62
GCFC2-207ENST00000470503 BAZ1BQ9UIG0 1483 aaKnown RBP37.52■■■■□ 3.6
GCFC2-207ENST00000470503 PEG3Q9GZU2 1588 aa37.49■■■■□ 3.59
GCFC2-207ENST00000470503 NESP48681 1621 aa37.32■■■■□ 3.57
GCFC2-207ENST00000470503 MROH2BQ7Z745 1585 aa37.29■■■■□ 3.56
GCFC2-207ENST00000470503 LAMC3Q9Y6N6 1575 aa37.18■■■■□ 3.54
GCFC2-207ENST00000470503 PDS5BQ9NTI5 1447 aa37.06■■■■□ 3.52
GCFC2-207ENST00000470503 THOC2Q8NI27 1593 aaKnown RBP36.96■■■■□ 3.51
GCFC2-207ENST00000470503 CADPSQ9ULU8 1353 aa36.93■■■■□ 3.5
GCFC2-207ENST00000470503 KIF21AQ7Z4S6 1674 aa36.77■■■■□ 3.48
GCFC2-207ENST00000470503 WIZO95785 1651 aa36.76■■■■□ 3.47
GCFC2-207ENST00000470503 MRC2Q9UBG0 1479 aa36.65■■■■□ 3.46
GCFC2-207ENST00000470503 RSF1Q96T23 1441 aaPredicted RBP36.57■■■■□ 3.44
GCFC2-207ENST00000470503 WDR62O43379 1518 aa36.54■■■■□ 3.44
GCFC2-207ENST00000470503 CEP164Q9UPV0 1460 aa36.49■■■■□ 3.43
GCFC2-207ENST00000470503 CFTRP13569 1480 aa36.47■■■■□ 3.43
GCFC2-207ENST00000470503 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
GCFC2-207ENST00000470503 TOP2AP11388 1531 aaKnown RBP36.41■■■■□ 3.42
GCFC2-207ENST00000470503 URB2Q14146 1524 aaKnown RBP36.08■■■■□ 3.37
GCFC2-207ENST00000470503 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.36
GCFC2-207ENST00000470503 OSCARQ8IYS5 282 aa36■■■■□ 3.35
GCFC2-207ENST00000470503 TRIM41Q8WV44 630 aa35.94■■■■□ 3.34
GCFC2-207ENST00000470503 PRDM2Q13029 1718 aa35.9■■■■□ 3.34
GCFC2-207ENST00000470503 IFT140Q96RY7 1462 aa35.81■■■■□ 3.32
GCFC2-207ENST00000470503 ABCC8Q09428 1581 aa35.8■■■■□ 3.32
GCFC2-207ENST00000470503 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
GCFC2-207ENST00000470503 ZNF608Q9ULD9 1512 aaPredicted RBP35.63■■■■□ 3.29
GCFC2-207ENST00000470503 DNMBPQ6XZF7 1577 aa35.59■■■■□ 3.29
GCFC2-207ENST00000470503 EIF4G3O43432 1585 aaKnown RBP35.4■■■■□ 3.26
GCFC2-207ENST00000470503 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
GCFC2-207ENST00000470503 POLA1P09884 1462 aaPredicted RBP35.35■■■■□ 3.25
GCFC2-207ENST00000470503 AQRO60306 1485 aaKnown RBP eCLIP35.35■■■■□ 3.259e-6■□□□□ 10.2
GCFC2-207ENST00000470503 RIMBP3CA6NJZ7 1639 aa35.31■■■■□ 3.24
GCFC2-207ENST00000470503 RIMBP3BA6NNM3 1639 aa35.31■■■■□ 3.24
GCFC2-207ENST00000470503 RIMBP3Q9UFD9 1639 aa35.31■■■■□ 3.24
GCFC2-207ENST00000470503 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
GCFC2-207ENST00000470503 SOGA1O94964 1423 aa35.25■■■■□ 3.23
GCFC2-207ENST00000470503 RAD54L2Q9Y4B4 1467 aa35.18■■■■□ 3.22
GCFC2-207ENST00000470503 FBLN2P98095 1184 aa35.17■■■■□ 3.22
GCFC2-207ENST00000470503 TDRD9Q8NDG6 1382 aaKnown RBP35.14■■■■□ 3.22
GCFC2-207ENST00000470503 WDR97A6NE52 1622 aa35.14■■■■□ 3.22
GCFC2-207ENST00000470503 FGD5Q6ZNL6 1462 aa35.1■■■■□ 3.21
GCFC2-207ENST00000470503 CYB5RLQ6IPT4 315 aa35.08■■■■□ 3.21
GCFC2-207ENST00000470503 CHD1O14646 1710 aa35.08■■■■□ 3.21
GCFC2-207ENST00000470503 CUX1P39880 1505 aa35.04■■■■□ 3.2
GCFC2-207ENST00000470503 CHMP7Q8WUX9 453 aaPredicted RBP34.98■■■■□ 3.19
GCFC2-207ENST00000470503 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
GCFC2-207ENST00000470503 MAGI1Q96QZ7 1491 aaPredicted RBP34.97■■■■□ 3.19
GCFC2-207ENST00000470503 GRIN2BQ13224 1484 aa34.96■■■■□ 3.19
GCFC2-207ENST00000470503 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
GCFC2-207ENST00000470503 SUPT5HO00267 1087 aaKnown RBP34.87■■■■□ 3.17
GCFC2-207ENST00000470503 SYNJ2O15056 1496 aa34.84■■■■□ 3.17
GCFC2-207ENST00000470503 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
GCFC2-207ENST00000470503 GAPVD1Q14C86 1478 aa34.81■■■■□ 3.16
GCFC2-207ENST00000470503 CLASP1Q7Z460 1538 aa34.81■■■■□ 3.16
GCFC2-207ENST00000470503 ABCA10Q8WWZ4 1543 aa34.77■■■■□ 3.16
GCFC2-207ENST00000470503 TRHP20396 242 aaPredicted RBP34.71■■■■□ 3.15
GCFC2-207ENST00000470503 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
GCFC2-207ENST00000470503 ABCA5Q8WWZ7 1642 aa34.62■■■■□ 3.13
GCFC2-207ENST00000470503 PBRM1Q86U86 1689 aa34.61■■■■□ 3.13
GCFC2-207ENST00000470503 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
GCFC2-207ENST00000470503 GRIN2AQ12879 1464 aa34.46■■■■□ 3.11
GCFC2-207ENST00000470503 BIVM-ERCC5R4GMW8 1640 aa34.45■■■■□ 3.11
GCFC2-207ENST00000470503 FHAD1B1AJZ9 1412 aa34.4■■■■□ 3.1
GCFC2-207ENST00000470503 NUP160Q12769 1436 aa34.39■■■■□ 3.1
GCFC2-207ENST00000470503 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
GCFC2-207ENST00000470503 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
GCFC2-207ENST00000470503 CEP170Q5SW79 1584 aa34.25■■■■□ 3.07
GCFC2-207ENST00000470503 SHROOM2Q13796 1616 aa34.15■■■■□ 3.06
GCFC2-207ENST00000470503 ERCC6L2Q5T890 1561 aa34.15■■■■□ 3.06
GCFC2-207ENST00000470503 JPH4Q96JJ6 628 aa34.09■■■■□ 3.05
GCFC2-207ENST00000470503 PRG4Q92954 1404 aaPredicted RBP34.04■■■■□ 3.04
GCFC2-207ENST00000470503 KIF27Q86VH2 1401 aa33.93■■■■□ 3.02
GCFC2-207ENST00000470503 IGF1RP08069 1367 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms