Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COMMD9Q9P000 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD9Q9P000 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD9Q9P000 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COMMD9Q9P000 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD9Q9P000 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD9Q9P000 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD9Q9P000 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD9Q9P000 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD9Q9P000 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
COMMD9Q9P000 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD9Q9P000 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD9Q9P000 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.54■■□□□ 1.04
COMMD9Q9P000 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD9Q9P000 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.54■■□□□ 1.04
COMMD9Q9P000 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.54■■□□□ 1.04
COMMD9Q9P000 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD9Q9P000 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD9Q9P000 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD9Q9P000 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD9Q9P000 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD9Q9P000 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD9Q9P000 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
COMMD9Q9P000 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COMMD9Q9P000 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD9Q9P000 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD9Q9P000 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD9Q9P000 BX255925.1-201ENST00000566954 1854 ntBASIC21.51■■□□□ 1.03
COMMD9Q9P000 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
COMMD9Q9P000 AL449106.1-201ENST00000608517 1980 ntBASIC21.5■■□□□ 1.03
COMMD9Q9P000 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.5■■□□□ 1.03
COMMD9Q9P000 WASH5P-204ENST00000632292 975 ntBASIC21.5■■□□□ 1.03
COMMD9Q9P000 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COMMD9Q9P000 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.5■■□□□ 1.03
COMMD9Q9P000 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD9Q9P000 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD9Q9P000 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD9Q9P000 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.5■■□□□ 1.03
COMMD9Q9P000 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.49■■□□□ 1.03
COMMD9Q9P000 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD9Q9P000 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD9Q9P000 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.48■■□□□ 1.03
COMMD9Q9P000 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD9Q9P000 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD9Q9P000 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD9Q9P000 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD9Q9P000 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.48■■□□□ 1.03
COMMD9Q9P000 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD9Q9P000 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.47■■□□□ 1.03
COMMD9Q9P000 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.47■■□□□ 1.03
COMMD9Q9P000 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COMMD9Q9P000 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD9Q9P000 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD9Q9P000 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD9Q9P000 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD9Q9P000 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD9Q9P000 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COMMD9Q9P000 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COMMD9Q9P000 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COMMD9Q9P000 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD9Q9P000 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.44■■□□□ 1.02
COMMD9Q9P000 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.44■■□□□ 1.02
COMMD9Q9P000 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD9Q9P000 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD9Q9P000 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD9Q9P000 AL133380.1-201ENST00000506013 324 ntBASIC21.43■■□□□ 1.02
COMMD9Q9P000 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD9Q9P000 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD9Q9P000 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD9Q9P000 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD9Q9P000 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD9Q9P000 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.42■■□□□ 1.02
COMMD9Q9P000 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COMMD9Q9P000 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD9Q9P000 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD9Q9P000 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.41■■□□□ 1.02
COMMD9Q9P000 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD9Q9P000 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.41■■□□□ 1.02
COMMD9Q9P000 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD9Q9P000 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COMMD9Q9P000 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD9Q9P000 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD9Q9P000 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.4■■□□□ 1.02
COMMD9Q9P000 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COMMD9Q9P000 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.4■■□□□ 1.02
COMMD9Q9P000 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COMMD9Q9P000 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.39■■□□□ 1.02
COMMD9Q9P000 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COMMD9Q9P000 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
COMMD9Q9P000 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.39■■□□□ 1.01
COMMD9Q9P000 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.38■■□□□ 1.01
COMMD9Q9P000 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.38■■□□□ 1.01
COMMD9Q9P000 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD9Q9P000 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD9Q9P000 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD9Q9P000 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD9Q9P000 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD9Q9P000 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.37■■□□□ 1.01
COMMD9Q9P000 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD9Q9P000 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms