Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
COMMD9Q9P000 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
COMMD9Q9P000 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.85■■■□□ 2.05
COMMD9Q9P000 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
COMMD9Q9P000 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COMMD9Q9P000 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COMMD9Q9P000 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COMMD9Q9P000 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COMMD9Q9P000 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
COMMD9Q9P000 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
COMMD9Q9P000 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.87■■□□□ 1.89
COMMD9Q9P000 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.83■■□□□ 1.89
COMMD9Q9P000 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.74■■□□□ 1.87
COMMD9Q9P000 AL356512.1-201ENST00000607453 1739 ntBASIC26.67■■□□□ 1.86
COMMD9Q9P000 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COMMD9Q9P000 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
COMMD9Q9P000 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.51■■□□□ 1.83
COMMD9Q9P000 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
COMMD9Q9P000 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
COMMD9Q9P000 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
COMMD9Q9P000 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.18■■□□□ 1.78
COMMD9Q9P000 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COMMD9Q9P000 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COMMD9Q9P000 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COMMD9Q9P000 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COMMD9Q9P000 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
COMMD9Q9P000 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
COMMD9Q9P000 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COMMD9Q9P000 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COMMD9Q9P000 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.75■■□□□ 1.71
COMMD9Q9P000 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
COMMD9Q9P000 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
COMMD9Q9P000 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COMMD9Q9P000 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COMMD9Q9P000 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
COMMD9Q9P000 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COMMD9Q9P000 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COMMD9Q9P000 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COMMD9Q9P000 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COMMD9Q9P000 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
COMMD9Q9P000 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COMMD9Q9P000 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
COMMD9Q9P000 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
COMMD9Q9P000 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
COMMD9Q9P000 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC25.33■■□□□ 1.65
COMMD9Q9P000 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COMMD9Q9P000 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COMMD9Q9P000 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
COMMD9Q9P000 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COMMD9Q9P000 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
COMMD9Q9P000 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COMMD9Q9P000 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COMMD9Q9P000 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
COMMD9Q9P000 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COMMD9Q9P000 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COMMD9Q9P000 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
COMMD9Q9P000 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COMMD9Q9P000 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
COMMD9Q9P000 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
COMMD9Q9P000 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COMMD9Q9P000 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COMMD9Q9P000 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
COMMD9Q9P000 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
COMMD9Q9P000 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COMMD9Q9P000 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.82■■□□□ 1.56
COMMD9Q9P000 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
COMMD9Q9P000 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COMMD9Q9P000 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COMMD9Q9P000 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.78■■□□□ 1.56
COMMD9Q9P000 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
COMMD9Q9P000 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
COMMD9Q9P000 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.74■■□□□ 1.55
COMMD9Q9P000 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
COMMD9Q9P000 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.73■■□□□ 1.55
COMMD9Q9P000 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
COMMD9Q9P000 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.7■■□□□ 1.54
COMMD9Q9P000 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.7■■□□□ 1.54
COMMD9Q9P000 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
COMMD9Q9P000 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
COMMD9Q9P000 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
COMMD9Q9P000 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COMMD9Q9P000 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.63■■□□□ 1.53
COMMD9Q9P000 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
COMMD9Q9P000 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
COMMD9Q9P000 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COMMD9Q9P000 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COMMD9Q9P000 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COMMD9Q9P000 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COMMD9Q9P000 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.54■■□□□ 1.52
COMMD9Q9P000 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COMMD9Q9P000 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.52■■□□□ 1.52
COMMD9Q9P000 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COMMD9Q9P000 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.52■■□□□ 1.52
COMMD9Q9P000 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.5■■□□□ 1.51
COMMD9Q9P000 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.49■■□□□ 1.51
COMMD9Q9P000 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.47■■□□□ 1.51
COMMD9Q9P000 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COMMD9Q9P000 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
COMMD9Q9P000 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COMMD9Q9P000 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms