Protein–RNA interactions for Protein: Q9NZ09

UBAP1, Ubiquitin-associated protein 1, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1Q9NZ09 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
UBAP1Q9NZ09 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
UBAP1Q9NZ09 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
UBAP1Q9NZ09 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
UBAP1Q9NZ09 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
UBAP1Q9NZ09 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
UBAP1Q9NZ09 AL031258.1-201ENST00000623562 325 ntBASIC24.01■■□□□ 1.43
UBAP1Q9NZ09 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
UBAP1Q9NZ09 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.01■■□□□ 1.43
UBAP1Q9NZ09 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24■■□□□ 1.43
UBAP1Q9NZ09 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
UBAP1Q9NZ09 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24■■□□□ 1.43
UBAP1Q9NZ09 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
UBAP1Q9NZ09 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
UBAP1Q9NZ09 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
UBAP1Q9NZ09 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
UBAP1Q9NZ09 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
UBAP1Q9NZ09 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
UBAP1Q9NZ09 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
UBAP1Q9NZ09 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
UBAP1Q9NZ09 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.97■■□□□ 1.43
UBAP1Q9NZ09 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBAP1Q9NZ09 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.96■■□□□ 1.43
UBAP1Q9NZ09 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
UBAP1Q9NZ09 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.95■■□□□ 1.42
UBAP1Q9NZ09 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
UBAP1Q9NZ09 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.93■■□□□ 1.42
UBAP1Q9NZ09 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBAP1Q9NZ09 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBAP1Q9NZ09 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBAP1Q9NZ09 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBAP1Q9NZ09 AC020928.2-201ENST00000588717 2197 ntBASIC23.92■■□□□ 1.42
UBAP1Q9NZ09 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBAP1Q9NZ09 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBAP1Q9NZ09 AC091060.1-201ENST00000623524 1766 ntBASIC23.91■■□□□ 1.42
UBAP1Q9NZ09 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.91■■□□□ 1.42
UBAP1Q9NZ09 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBAP1Q9NZ09 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.91■■□□□ 1.42
UBAP1Q9NZ09 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBAP1Q9NZ09 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
UBAP1Q9NZ09 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
UBAP1Q9NZ09 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
UBAP1Q9NZ09 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.89■■□□□ 1.41
UBAP1Q9NZ09 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
UBAP1Q9NZ09 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBAP1Q9NZ09 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.88■■□□□ 1.41
UBAP1Q9NZ09 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.88■■□□□ 1.41
UBAP1Q9NZ09 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBAP1Q9NZ09 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBAP1Q9NZ09 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBAP1Q9NZ09 AC093323.1-202ENST00000635031 2045 ntBASIC23.86■■□□□ 1.41
UBAP1Q9NZ09 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UBAP1Q9NZ09 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
UBAP1Q9NZ09 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.86■■□□□ 1.41
UBAP1Q9NZ09 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.86■■□□□ 1.41
UBAP1Q9NZ09 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.85■■□□□ 1.41
UBAP1Q9NZ09 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.85■■□□□ 1.41
UBAP1Q9NZ09 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBAP1Q9NZ09 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBAP1Q9NZ09 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBAP1Q9NZ09 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBAP1Q9NZ09 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBAP1Q9NZ09 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
UBAP1Q9NZ09 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
UBAP1Q9NZ09 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
UBAP1Q9NZ09 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.83■■□□□ 1.41
UBAP1Q9NZ09 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBAP1Q9NZ09 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBAP1Q9NZ09 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBAP1Q9NZ09 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBAP1Q9NZ09 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.82■■□□□ 1.4
UBAP1Q9NZ09 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBAP1Q9NZ09 LINC01003-201ENST00000564834 1764 ntBASIC23.82■■□□□ 1.4
UBAP1Q9NZ09 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
UBAP1Q9NZ09 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBAP1Q9NZ09 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.81■■□□□ 1.4
UBAP1Q9NZ09 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBAP1Q9NZ09 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBAP1Q9NZ09 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBAP1Q9NZ09 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBAP1Q9NZ09 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.8■■□□□ 1.4
UBAP1Q9NZ09 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBAP1Q9NZ09 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBAP1Q9NZ09 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBAP1Q9NZ09 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBAP1Q9NZ09 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
UBAP1Q9NZ09 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBAP1Q9NZ09 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.79■■□□□ 1.4
UBAP1Q9NZ09 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBAP1Q9NZ09 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.79■■□□□ 1.4
UBAP1Q9NZ09 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBAP1Q9NZ09 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
UBAP1Q9NZ09 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms