Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.74■■■□□ 2.19
CUEDC2Q9H467 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CUEDC2Q9H467 AC135983.2-203ENST00000454486 1613 ntBASIC28.73■■■□□ 2.19
CUEDC2Q9H467 LINC00273-201ENST00000539813 1452 ntBASIC28.72■■■□□ 2.19
CUEDC2Q9H467 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUEDC2Q9H467 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUEDC2Q9H467 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CUEDC2Q9H467 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CUEDC2Q9H467 AC100797.4-201ENST00000631653 1827 ntBASIC28.71■■■□□ 2.19
CUEDC2Q9H467 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CUEDC2Q9H467 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.19
CUEDC2Q9H467 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.7■■■□□ 2.18
CUEDC2Q9H467 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.7■■■□□ 2.18
CUEDC2Q9H467 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CUEDC2Q9H467 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.69■■■□□ 2.18
CUEDC2Q9H467 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.69■■■□□ 2.18
CUEDC2Q9H467 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.69■■■□□ 2.18
CUEDC2Q9H467 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CUEDC2Q9H467 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.69■■■□□ 2.18
CUEDC2Q9H467 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
CUEDC2Q9H467 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
CUEDC2Q9H467 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CUEDC2Q9H467 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.68■■■□□ 2.18
CUEDC2Q9H467 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CUEDC2Q9H467 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
CUEDC2Q9H467 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUEDC2Q9H467 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUEDC2Q9H467 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUEDC2Q9H467 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUEDC2Q9H467 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
CUEDC2Q9H467 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.64■■■□□ 2.18
CUEDC2Q9H467 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CUEDC2Q9H467 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CUEDC2Q9H467 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CUEDC2Q9H467 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.63■■■□□ 2.17
CUEDC2Q9H467 WHAMMP2-203ENST00000563942 1603 ntBASIC28.63■■■□□ 2.17
CUEDC2Q9H467 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CUEDC2Q9H467 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CUEDC2Q9H467 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.62■■■□□ 2.17
CUEDC2Q9H467 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.62■■■□□ 2.17
CUEDC2Q9H467 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CUEDC2Q9H467 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CUEDC2Q9H467 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
CUEDC2Q9H467 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CUEDC2Q9H467 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.6■■■□□ 2.17
CUEDC2Q9H467 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.6■■■□□ 2.17
CUEDC2Q9H467 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CUEDC2Q9H467 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
CUEDC2Q9H467 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CUEDC2Q9H467 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CUEDC2Q9H467 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.59■■■□□ 2.17
CUEDC2Q9H467 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CUEDC2Q9H467 AP002414.2-202ENST00000590929 1450 ntBASIC28.59■■■□□ 2.17
CUEDC2Q9H467 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CUEDC2Q9H467 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CUEDC2Q9H467 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.58■■■□□ 2.17
CUEDC2Q9H467 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CUEDC2Q9H467 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CUEDC2Q9H467 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.58■■■□□ 2.17
CUEDC2Q9H467 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CUEDC2Q9H467 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.56■■■□□ 2.16
CUEDC2Q9H467 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.56■■■□□ 2.16
CUEDC2Q9H467 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CUEDC2Q9H467 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CUEDC2Q9H467 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.55■■■□□ 2.16
CUEDC2Q9H467 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.55■■■□□ 2.16
CUEDC2Q9H467 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
CUEDC2Q9H467 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CUEDC2Q9H467 BX255925.1-201ENST00000566954 1854 ntBASIC28.53■■■□□ 2.16
CUEDC2Q9H467 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.53■■■□□ 2.16
CUEDC2Q9H467 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CUEDC2Q9H467 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CUEDC2Q9H467 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CUEDC2Q9H467 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
CUEDC2Q9H467 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
CUEDC2Q9H467 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.5■■■□□ 2.15
CUEDC2Q9H467 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CUEDC2Q9H467 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CUEDC2Q9H467 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.5■■■□□ 2.15
CUEDC2Q9H467 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
CUEDC2Q9H467 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CUEDC2Q9H467 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CUEDC2Q9H467 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
CUEDC2Q9H467 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CUEDC2Q9H467 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.47■■■□□ 2.15
CUEDC2Q9H467 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CUEDC2Q9H467 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.47■■■□□ 2.15
CUEDC2Q9H467 LINC01003-201ENST00000564834 1764 ntBASIC28.47■■■□□ 2.15
CUEDC2Q9H467 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUEDC2Q9H467 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUEDC2Q9H467 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CUEDC2Q9H467 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
CUEDC2Q9H467 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CUEDC2Q9H467 DUX4L29-201ENST00000425409 679 ntBASIC28.45■■■□□ 2.14
CUEDC2Q9H467 AC021231.2-201ENST00000594613 730 ntBASIC28.45■■■□□ 2.14
CUEDC2Q9H467 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.45■■■□□ 2.14
CUEDC2Q9H467 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
CUEDC2Q9H467 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.44■■■□□ 2.14
CUEDC2Q9H467 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CUEDC2Q9H467 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms