Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MIR762-201ENST00000390236 83 ntBASIC23.59■■□□□ 1.37
POLR2J3Q9H1A7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
POLR2J3Q9H1A7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
POLR2J3Q9H1A7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
POLR2J3Q9H1A7 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.58■■□□□ 1.37
POLR2J3Q9H1A7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
POLR2J3Q9H1A7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
POLR2J3Q9H1A7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
POLR2J3Q9H1A7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
POLR2J3Q9H1A7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
POLR2J3Q9H1A7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
POLR2J3Q9H1A7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
POLR2J3Q9H1A7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
POLR2J3Q9H1A7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
POLR2J3Q9H1A7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.55■■□□□ 1.36
POLR2J3Q9H1A7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
POLR2J3Q9H1A7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
POLR2J3Q9H1A7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.54■■□□□ 1.36
POLR2J3Q9H1A7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.54■■□□□ 1.36
POLR2J3Q9H1A7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
POLR2J3Q9H1A7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
POLR2J3Q9H1A7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
POLR2J3Q9H1A7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
POLR2J3Q9H1A7 BX255925.1-201ENST00000566954 1854 ntBASIC23.52■■□□□ 1.36
POLR2J3Q9H1A7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
POLR2J3Q9H1A7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
POLR2J3Q9H1A7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
POLR2J3Q9H1A7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
POLR2J3Q9H1A7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
POLR2J3Q9H1A7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
POLR2J3Q9H1A7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
POLR2J3Q9H1A7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.51■■□□□ 1.35
POLR2J3Q9H1A7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
POLR2J3Q9H1A7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
POLR2J3Q9H1A7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
POLR2J3Q9H1A7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
POLR2J3Q9H1A7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
POLR2J3Q9H1A7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.5■■□□□ 1.35
POLR2J3Q9H1A7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.49■■□□□ 1.35
POLR2J3Q9H1A7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
POLR2J3Q9H1A7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.49■■□□□ 1.35
POLR2J3Q9H1A7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
POLR2J3Q9H1A7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
POLR2J3Q9H1A7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
POLR2J3Q9H1A7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.48■■□□□ 1.35
POLR2J3Q9H1A7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
POLR2J3Q9H1A7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
POLR2J3Q9H1A7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
POLR2J3Q9H1A7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
POLR2J3Q9H1A7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
POLR2J3Q9H1A7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.47■■□□□ 1.35
POLR2J3Q9H1A7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.47■■□□□ 1.35
POLR2J3Q9H1A7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
POLR2J3Q9H1A7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
POLR2J3Q9H1A7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
POLR2J3Q9H1A7 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.46■■□□□ 1.35
POLR2J3Q9H1A7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
POLR2J3Q9H1A7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.45■■□□□ 1.35
POLR2J3Q9H1A7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
POLR2J3Q9H1A7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
POLR2J3Q9H1A7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
POLR2J3Q9H1A7 AC005559.1-201ENST00000589661 871 ntBASIC23.45■■□□□ 1.34
POLR2J3Q9H1A7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.45■■□□□ 1.34
POLR2J3Q9H1A7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
POLR2J3Q9H1A7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
POLR2J3Q9H1A7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.44■■□□□ 1.34
POLR2J3Q9H1A7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.44■■□□□ 1.34
POLR2J3Q9H1A7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.44■■□□□ 1.34
POLR2J3Q9H1A7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
POLR2J3Q9H1A7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
POLR2J3Q9H1A7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
POLR2J3Q9H1A7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
POLR2J3Q9H1A7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.43■■□□□ 1.34
POLR2J3Q9H1A7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.42■■□□□ 1.34
POLR2J3Q9H1A7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.42■■□□□ 1.34
POLR2J3Q9H1A7 SUZ12P1-203ENST00000578195 985 ntBASIC23.42■■□□□ 1.34
POLR2J3Q9H1A7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.42■■□□□ 1.34
POLR2J3Q9H1A7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
POLR2J3Q9H1A7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
POLR2J3Q9H1A7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
POLR2J3Q9H1A7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.4■■□□□ 1.34
POLR2J3Q9H1A7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
POLR2J3Q9H1A7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
POLR2J3Q9H1A7 AC108673.1-201ENST00000510422 1159 ntBASIC23.39■■□□□ 1.33
POLR2J3Q9H1A7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
POLR2J3Q9H1A7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
POLR2J3Q9H1A7 AC100797.4-201ENST00000631653 1827 ntBASIC23.38■■□□□ 1.33
POLR2J3Q9H1A7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.38■■□□□ 1.33
POLR2J3Q9H1A7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
POLR2J3Q9H1A7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
POLR2J3Q9H1A7 LINC01003-201ENST00000564834 1764 ntBASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 AP002414.2-202ENST00000590929 1450 ntBASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms